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PLM3_60_coex_sep16_scaffold_65456_3

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: comp(2700..3002)

Top 3 Functional Annotations

Value Algorithm Source
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 93.0
  • Bit_score: 113
  • Evalue 1.00e-22
GAF sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 99.0
  • Bit_score: 88
  • Evalue 1.00e-15
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ADU50854.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 99.0
  • Bit_score: 88
  • Evalue 5.00e-15

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Taxonomy

Thermaerobacter marianensis → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 303
CACCTCGTCGGCAGTCGGGCGTTATGCCGGCTGGCCGAAGCGATCCGGCGGACCTGTCGGGTGATCGATCTCCCGGCCCGATTCGGCGGGGACGAGTTCGCCCTGATCCTTCCCGAGACGAGCGAGGAGGAGGCGGACCGCGTGGCGCTGCGTGTGTGCGAGCGACTGGCCACGGACCCTGAGCGGCCTGCGCTGTCCACGAGCGTCGGCGTGGCGGTGTATCCCCGGGACGGCGACACGATCGAGCGCCTGCTCGGTGCCGCGGACCGGGCCCTCTATGGAATGAAGAGAGCCCTCGCCTAA
PROTEIN sequence
Length: 101
HLVGSRALCRLAEAIRRTCRVIDLPARFGGDEFALILPETSEEEADRVALRVCERLATDPERPALSTSVGVAVYPRDGDTIERLLGAADRALYGMKRALA*