ggKbase home page

PLM3_60_coex_sep16_scaffold_16069_2

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(1262..2062)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 265.0
  • Bit_score: 402
  • Evalue 2.90e-109
ABC-type transporter, periplasmic subunit similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 262.0
  • Bit_score: 251
  • Evalue 1.40e-64
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 265.0
  • Bit_score: 403
  • Evalue 1.90e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 801
GTGTACGGCAAGGCCGGCGTCGAGTTCCCCCAGCGCGTCGTCTGTCTCACCGCGGAGACCACCGAGATCGCCTTCACGCTCGGCGCCGGCGACCGCGTGGTCGGCGTGCCCGGCACGGCGCGCCGGCCCGACGCCGCCCGCGCGCGGGCGCGCGTGGGCGGCTTCACCACGTTCCGGTCCGACAAGATCCTGGCGCTGGAGCCCGACCTCGTGCTGGCGTTCTCCGACCTGCAGCGCGAGGTCGTGGGCGAGCTGATCGCCGCCGGCGTGAGCGTGCTCTGCACCAACCAGCGCTCCTTCGACGAGGTCCTGCGCGCCATCCTGCTCATCGGCGGCGCGCTCGGCTGCGAGGGGGCCGCCCGCGAGCTGATCGCCGACATGCGCGACGAGGTCAAGCAGGTACGCGAGTACTCGTCGGTGTGGCCCGACCGGCCACGCGTGTACTTCGAGGAGTGGATGGACCCGCTCATCGCCGGCATCGGCTGGGTCTCGGACCTGATCGACATCGCCGGCGGCCGCGACGTCTTCGCCGAGCTGCGCGAGCGGGGCGGGGCGCGCGAGCGCATCGTCGCGGCGGCGGAGGTCGCGCGTCGCGACCCGCAGATCATCCTGGCGTCGTGGTGCGGCAAGCCGGTCGATCGCGCGGCGATCGTCGCCCGACCGGGCTGGAGCACGGTGGCCGCGGTCAGGGCGGACCAGATCCACGAGATTCCCGGCGAGGACGTGCTCGCGCCCGGTCCCTCGCTCATGCACGGATTGAAGCGAATCCACGAGATAATTCACGCCTTCCAGGCCGGCTGA
PROTEIN sequence
Length: 267
VYGKAGVEFPQRVVCLTAETTEIAFTLGAGDRVVGVPGTARRPDAARARARVGGFTTFRSDKILALEPDLVLAFSDLQREVVGELIAAGVSVLCTNQRSFDEVLRAILLIGGALGCEGAARELIADMRDEVKQVREYSSVWPDRPRVYFEEWMDPLIAGIGWVSDLIDIAGGRDVFAELRERGGARERIVAAAEVARRDPQIILASWCGKPVDRAAIVARPGWSTVAAVRADQIHEIPGEDVLAPGPSLMHGLKRIHEIIHAFQAG*