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PLM3_60_coex_sep16_scaffold_308_12

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(18758..19807)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator Tax=Frankia sp. EUN1f RepID=D3D4F4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 350.0
  • Bit_score: 494
  • Evalue 7.50e-137
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EFC82219.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 350.0
  • Bit_score: 494
  • Evalue 1.00e-136
substrate-binding component of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 339.0
  • Bit_score: 485
  • Evalue 1.30e-134

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGGCTGATCGGTTCGCGCCGCCACGCCGGCCGTGGCGGGTGGGGCTCGCCATGGCCGGCGTCGCGCTGGCGCTGCTGGCGACCGGCTGTGCCGGCCGGGACGAGGGTGGCGGGTCGGGGGGCGACCAGGTCCAGGTCGGGCTCATCACCAAGACCGAGACCAACCCGTTCTTCGTCAAGATGAAAGAGGGCGCCGAGAAGGAGGCCCAGGCCAAGGGCGCCAAGCTGCTGACGGCCGCCGGCAAGTTCGACACCGACAACGCCAGCCAGGTCACCGCCATCGAGAACATGGTCGCGGCCGGGGTCAAGGGGATCCTGATCACCCCGGGCGACACCAAGGCGATCGTCCCGGCGATCCAGAAGGCGCGGGACGCCGGCGTGCTGGTGATCGCGCTGGACACCCCGACCCAGCCGCAGAGCGCCGTGGACGCGCTGTTCGCCACCGACAACTTCAAGGCCGGCGTGCTCATCGGCCAGTACGCCAAGGCCGCCCAGGGCGGCAAGCCGGCCAAGATCGCCACCCTCGACCTGGCGCCCGGCATCTCGGTGGGGGTGCTGCGCCACAACGGCTTCCTGAACGGCTACGGCGCCGCCAGCGTCGACCAGAACGCCACCGAGCAGGCCACCAGCTCCGAGGTCGTCTGCAGCCAGGACACCCTGGGCGACCAGGCCAAGGGCCAGACCGCGATGGAGAACTGCCTGCAGAAGGACCCCAGCATCAACCTGGTCTACACCATCAACGAACCGGCCGCCCTGGGCGCCTACAACGCCCTCAAGGCGGCAGGCAAGGACAAGGACGTCACGATCGTGTCGGTCGACGGCGGCTGCACCGGCGTGCAGGCCGTCAAGGACGGCAAGATCGCCGCGACCTCGCAGCAGTACCCGCTGAAGATGGCGCAGCAGGGCGTCGCCGCGGTGGTGGACTTCGCGAAGAGCGGCACCAAGGCGTCGGGCTACACCGACACCGGCGTGACCCTGATCACCGACACACCGCAGCAGGGCGTCGAGTCCAAGGACACCACCTTCGGCACCGAGAACTGCTGGGGTTGA
PROTEIN sequence
Length: 350
MADRFAPPRRPWRVGLAMAGVALALLATGCAGRDEGGGSGGDQVQVGLITKTETNPFFVKMKEGAEKEAQAKGAKLLTAAGKFDTDNASQVTAIENMVAAGVKGILITPGDTKAIVPAIQKARDAGVLVIALDTPTQPQSAVDALFATDNFKAGVLIGQYAKAAQGGKPAKIATLDLAPGISVGVLRHNGFLNGYGAASVDQNATEQATSSEVVCSQDTLGDQAKGQTAMENCLQKDPSINLVYTINEPAALGAYNALKAAGKDKDVTIVSVDGGCTGVQAVKDGKIAATSQQYPLKMAQQGVAAVVDFAKSGTKASGYTDTGVTLITDTPQQGVESKDTTFGTENCWG*