ggKbase home page

PLM3_60_coex_sep16_scaffold_3134_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(1745..1915)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WSF2_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 51.0
  • Bit_score: 95
  • Evalue 9.50e-18
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 51.0
  • Bit_score: 95
  • Evalue 2.70e-18
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU40822.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 51.0
  • Bit_score: 95
  • Evalue 1.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGGGCCGCTTCGCCGTTCCCGGCGACATCGCCGCGGCGGTGGCGTTCCTGGCCGACCCCGAACGCAGCGGCTTCGTCAACGGGGTGGCGCTGCCGGTCGACGGCGGCTGGACGGCCGATGCCGGCTGGACCGCGCTGCGGCTGCGCAAACGAAGCGGTACCACCGACTGA
PROTEIN sequence
Length: 57
MGRFAVPGDIAAAVAFLADPERSGFVNGVALPVDGGWTADAGWTALRLRKRSGTTD*