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PLM3_60_coex_sep16_scaffold_3134_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(2862..3167)

Top 3 Functional Annotations

Value Algorithm Source
WhiB family transcriptional regulator Tax=Saccharopolyspora spinosa RepID=UPI0002378EEB similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 86.0
  • Bit_score: 113
  • Evalue 8.00e-23
Transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 112
  • Evalue 5.00e-23
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 112
  • Evalue 2.50e-22

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Taxonomy

Kytococcus sedentarius → Kytococcus → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGCAGACCCTGGAGCTGTTCCCGCCCGGGCGAGCGCTGCCATGCGTGCAGGCGGGACCCGACCTCTACTTCTCCGAGTCACCCCGCGAGCTGGAGCTGGCCAAGCAGCTCTGTCGGCCCTGCCCGCTGCGCACACGCTGCCTGGAGGGCGCCATCGAGCGCCACGAGCCCTGGGGCGTGTGGGGCGGAGAGGTGTTCGTCGACGGCCGGCCCGTGCCCTTCAAGCGTTCCCGGGGACGACCCCGCAAGCATCCGCTGCCCCCGCTCCCGGCCGAGCTACCGGCCGCGCAGGCCGAGGCCTGCTGA
PROTEIN sequence
Length: 102
MQTLELFPPGRALPCVQAGPDLYFSESPRELELAKQLCRPCPLRTRCLEGAIERHEPWGVWGGEVFVDGRPVPFKRSRGRPRKHPLPPLPAELPAAQAEAC*