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PLM3_60_coex_sep16_scaffold_8073_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 3261..4226

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 321.0
  • Bit_score: 248
  • Evalue 1.20e-62
MFS transporter Tax=Serinicoccus marinus RepID=UPI0003B3AFD8 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 313.0
  • Bit_score: 248
  • Evalue 6.60e-63
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 319.0
  • Bit_score: 243
  • Evalue 4.60e-62

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Taxonomy

Gordonia amarae → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 966
GTGAGCCCGTCCGGCGCGGCGCGGCCCGGCCGGCGCGGCCCCGCGGCCGCCGCCGGTGGGGGCTCCCAGCCGCGCCGTTCCGGGGCGGCTCCCTCCTCCCGGCGCTCGCCCCGCAAGCGGGCGGACGACCAGGGCGCCGCCGCCAGGCGACCCGCGGCGGGCTCGCGGGGCGCGGGGGGCGCCGGGGGCGGTCGAGCCGGGGACGCCGTGCGGAGCGGGGCCCAGGACGGAGGAGCCGCAGGGGCCGGGAAGCCGCTACGGCTCAATAAGGCGTTGAGCGCTGCCGGGCTCGGCTCGCGGCGCGCGGTCGAGGACCTCGTGCGGGCCGGCCGGGTCTCGATCGACGGCGAGGTCGTCCAGAACCTGGGCCGCCGGGTGGACCCGGCCCACGACCGGGTCACCGTCGACGGCTCCCGCGTCGTGCTCGACGAGCGGCGCCGCTACTGGCTGCTCAACAAGCCGGCCGGCGTGATCAGCACCGCCGCCGATCCGTCCGGGCGCCCAACGGTCGTCGGGCTGGTGCCCGACCAGCCGCGGGTCTTCCCGGTCGGGCGGCTGGACCGCGACACCGAGGGGCTGCTGCTGCTCACCAACGACGGCCCGCTCGCCTACCGGCTCACCCACGCCCGCTACGGCGTGGAGAAGCGCTACCTGGCGGAGGTCGAGCGGCTGCCCGCCGACGCTCCGGCCCGACTGCGGAAGGGCGTCGAGCTCCAGGACGGCCTGGCCAAGCCCGTCCGGGTGCGGGTCGTCGCCGGCACCGGCCGGCGCCGCATGATCGAGGTCGTCCTGGTCGAAGGGCGCAACCGCGAGGTGCGCCGGCTGCTCGAGGCGGTCGGTGCGCCGGTGCGCCGGCTGGTGCGGACCGCCGTGGGCCCGATCCGGCTGACCGGCCTGGCGCCAGGGGAGTTCCGGGCGCTCCGACCCGACGAGATCCGCGGCCTCTACCGGGCGATCGGCCTATGA
PROTEIN sequence
Length: 322
VSPSGAARPGRRGPAAAAGGGSQPRRSGAAPSSRRSPRKRADDQGAAARRPAAGSRGAGGAGGGRAGDAVRSGAQDGGAAGAGKPLRLNKALSAAGLGSRRAVEDLVRAGRVSIDGEVVQNLGRRVDPAHDRVTVDGSRVVLDERRRYWLLNKPAGVISTAADPSGRPTVVGLVPDQPRVFPVGRLDRDTEGLLLLTNDGPLAYRLTHARYGVEKRYLAEVERLPADAPARLRKGVELQDGLAKPVRVRVVAGTGRRRMIEVVLVEGRNREVRRLLEAVGAPVRRLVRTAVGPIRLTGLAPGEFRALRPDEIRGLYRAIGL*