ggKbase home page

PLM3_60_coex_sep16_scaffold_10405_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(1061..2761)

Top 3 Functional Annotations

Value Algorithm Source
Kelch repeat-containing protein bin=GWC2_Chloroflexi_73_18 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 578.0
  • Bit_score: 631
  • Evalue 4.90e-178
kelch repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 585.0
  • Bit_score: 617
  • Evalue 2.70e-174
Tax=RBG_16_RIF_CHLX_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 591.0
  • Bit_score: 617
  • Evalue 1.00e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_69_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1701
ATGCGAACGAGACGGGCGCGATGGCTGGTGCCATTGCTGCTCGTCGCCGGTCTTCTCGTCTCGGCACCGGTCGGCACGGCTCAGGGCGCGCCGGAGGCCACCCAAGCCAGCCTCAAACCCAAGTTCAGCAGCGCGGTCGCGTTCGACGTGTCGCCCGCCATGAGCGACGTCGCCAAGCAGGCGACCACGGCCGCCAGGAGGGCCACCGGGAACCTGGACCGCCCGGAGCGCGGCCCGGCATCGGCGGGACGCGGCTTCAGCGGTGACGCCGCGGTGCAGTCAACCACCGGTCGCAGCGCCGCCAGCATCGACATCCCCTCGCCGACGGTGAACTTCGAGGGAGTCCGCGGCACCGACAACATCCCTGTCCTCGGCGGCATCCCCATCCCGCCGGACCCCGACGGCGACGTCGGCCCCAACCACTACGTGCAGATGGTCAACACGATCTGGGCCGTGTACTCGAAGACAGGCACGCGGCTGCTCGGCCCGCTGAGCCTGGCGTCCATCTGGGCCGGCTTCGAGGTGCCGGACTGTGAGGACAACAGCGGCGACCCGATCGTGCTCCACGACCAGCTCGCCAACCGCTTCATCCTCACCCAGTTCACCACCATCGGGCCGAACTACTACAACTGCGTCGCGGTCTCCACCGGCCCGAACCCCACCGGCAGCTACTTCCGCTACGCGTTCTCCACCGGCGTCAACTTCCCCGACTACCCCAAGTACGGCGTGTGGCCGAACGCCTACTTCCTGACCACCCGCGAGTTCGCGCCCGACGACAGCTTCGCCGGCATCGGCGTGTACGCGCTGGAGCGGCGCAAGATGATCAACGGCAACCCGGCCGCCCGTGCCGTCTCGTTCCTGGTCGGGCCCGGCACCGGCGCTCCGGAGTACCTCACCGGTGACGGCTGGCTCCCCTCGGACCTGGACGGCACCAGAAGGCCACCGGCCGGCAGCCCCAACTACATCGTCGGCACCCAGGACGACGAGGGCCCGTACGGCGCGCCGTTCGACGCCATCAACGTCTTCAAGATGTTCGTGTCGTGGGGGTCGACGCCGACCGCGGCGTTCGCCGGACCGACCGTGGTCCCGGTGGCCGAGTTCGACTCGGACTTCCCCTGCGTCCCGCCGGGCACCCGAAGCTGCATCCCGCAGCCGGGGACGTCGCAGCGGATCGACATCCTCTCCTACCGGCAACGGCCGATCTGGCGGCTGGCCTACCGCAACTTCGGTTCCTACGAGTCGCTGGTGACCAACCAGTCGGTGGAGGCGTCGCCTGGCGTCGCCGGCACCCGCTGGTACGAGATCCGGCGCCCCGGCGACCAGCCGGTCATCTGGCAGCAGGCCACCTACGCGCCGGCCGACGGCGTCAACCGCTGGATGGGGAGCATCGCCCAGGACAAGCGGGGCAACATGGCGCTCGGCTACAGCGTGTCCAACGGGACCAACGTGTTCCCGGGGATCCGCTACACCGGCCGGCTCAGGGGCGATCCCGCCAACACGCTGCCGCAGGGCGAGGCCGTGATCGTCAACGGCGGCGGCTCCCAGACCGACCCGTTCGCCCGCTGGGGCGACTACACCTCGATGAACGTCGACCCGAGGGACGACTGCCGCTTCTGGTACACCAACGAGTACTACGCGGCGACCTCCGGCCGGGGCTGGCAGACCCGGATCGCGGCCTTCCGCATGCCAGGCTGCAGCTAG
PROTEIN sequence
Length: 567
MRTRRARWLVPLLLVAGLLVSAPVGTAQGAPEATQASLKPKFSSAVAFDVSPAMSDVAKQATTAARRATGNLDRPERGPASAGRGFSGDAAVQSTTGRSAASIDIPSPTVNFEGVRGTDNIPVLGGIPIPPDPDGDVGPNHYVQMVNTIWAVYSKTGTRLLGPLSLASIWAGFEVPDCEDNSGDPIVLHDQLANRFILTQFTTIGPNYYNCVAVSTGPNPTGSYFRYAFSTGVNFPDYPKYGVWPNAYFLTTREFAPDDSFAGIGVYALERRKMINGNPAARAVSFLVGPGTGAPEYLTGDGWLPSDLDGTRRPPAGSPNYIVGTQDDEGPYGAPFDAINVFKMFVSWGSTPTAAFAGPTVVPVAEFDSDFPCVPPGTRSCIPQPGTSQRIDILSYRQRPIWRLAYRNFGSYESLVTNQSVEASPGVAGTRWYEIRRPGDQPVIWQQATYAPADGVNRWMGSIAQDKRGNMALGYSVSNGTNVFPGIRYTGRLRGDPANTLPQGEAVIVNGGGSQTDPFARWGDYTSMNVDPRDDCRFWYTNEYYAATSGRGWQTRIAAFRMPGCS*