ggKbase home page

PLM3_5_b1_sep16_scaffold_235_31

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(27922..29208)

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase family protein Tax=Tetrasphaera elongata Lp2 RepID=N0E1W9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 407.0
  • Bit_score: 372
  • Evalue 4.00e-100
Phage integrase family protein {ECO:0000313|EMBL:CCH69751.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 407.0
  • Bit_score: 372
  • Evalue 5.60e-100
putative phage-related integrase similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 282.0
  • Bit_score: 317
  • Evalue 4.30e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera elongata → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGGCCGGGAAGGTCACCCGATGGCGAGCTCGGTACGTCGACAATGCCGGTAAGGAGCACACGGGCCACTTCGATCGGAAGGTCGACGCGCAGAAATGGCTCAAAGACGCGATGGCCTCCGTCGTTCGCGGCGACCATGTTGCGCCGAAGGTGGCGAGGCTGACAGTCGGGGAGTGGAGCGACAAGTGGCTCGACGGCTACCGCACCCGGCGCAAGTCCACCGTGCGGCAGGCGGAGGTGCATCTGAAGCTCATCAAGGAGCACTTCGGCGCAGTGCCTCTGGCTTCGGTCAAACCGTCAGACGTCCGTGGCTGGACCGCCCAGCTCAAGGCTGAGGGACGGGCCGACTCGTACGCCTACGCCCTCCACGCTCGCCTCTCGCAGCTCTTCAGCGACGCCGTGCATGATGGCATCGTTCCCCGCAATCCCTGCTCCCGCGGGACATCGCCGGGCACAGGAAAGCAGCGGCCGTACGTCGCAACCACCGAACAGGTCTGGGCTCTGTACAACGCCGTACCCGCTGGCATCCGACCTGCGATTTTGCTCGGCGCTCACGCCGGGCTGCGGCTTGCCGAGGCGGCAGTGCTACGCCCCGAGGACGTCGACTTCATCCGCGGAGTCGTCTCCCCGGCAATCCAGTGGCCAAGCGAGCCACTGAAGTCGCACACCAGCAAGACGCCCATCCCGATTCCGAACGAACTCTCCCTGGAGCTATCCGCGACTTTCGCGCGAGGGAGAGGGCTGACTATCGTCACTGCCGAGGACGGACGCCCGATCGCCGGACCCTGGGCCATCGAGCGAGCCGTACGCGATGCACGATCCAAGGTCGAGTCTGGCCAGACAAGGACGAGTCCTCGCGTGCCGCGGTCGCCGCGGTCTACGCAGCCCGACCACATGCGGAAGGCGGAAGGGGCGCGAGTGGATCGGCTTGAGGACGTCCTGCGGGCTGGTGAGTCCTCCGACGACCTCGTCCTTCTGCTTCGCGGTGGCGAGGACACGAGTGCCAAGCTTTTGCGCCAGGCCGCGCTCTTTGAGGCGCGCTACACCTACGGCGGCCAGGGTGCGCGTGGGATGTCACTCTTCGCTGCGAGCAGCGCGGTCGACGAGTTGGCCGTGCTCGAATCGAGGCTCCGGACTTACTTACCCCGAAGTACCGCCGGGTGCCCGGGGCCGCGGTTGCCGAAATTGCAGCGCTCCTGCCTACGTTCCAAGCGCCTCATTGGACCGTCCTGTTCCGGCCGCCCGGCGGAGCCCGTCAGCCGGAGGAAGAGTTGCTCAACGATTTGA
PROTEIN sequence
Length: 429
MAGKVTRWRARYVDNAGKEHTGHFDRKVDAQKWLKDAMASVVRGDHVAPKVARLTVGEWSDKWLDGYRTRRKSTVRQAEVHLKLIKEHFGAVPLASVKPSDVRGWTAQLKAEGRADSYAYALHARLSQLFSDAVHDGIVPRNPCSRGTSPGTGKQRPYVATTEQVWALYNAVPAGIRPAILLGAHAGLRLAEAAVLRPEDVDFIRGVVSPAIQWPSEPLKSHTSKTPIPIPNELSLELSATFARGRGLTIVTAEDGRPIAGPWAIERAVRDARSKVESGQTRTSPRVPRSPRSTQPDHMRKAEGARVDRLEDVLRAGESSDDLVLLLRGGEDTSAKLLRQAALFEARYTYGGQGARGMSLFAASSAVDELAVLESRLRTYLPRSTAGCPGPRLPKLQRSCLRSKRLIGPSCSGRPAEPVSRRKSCSTI*