ggKbase home page

PLM3_5_b1_sep16_scaffold_2429_6

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(5343..6380)

Top 3 Functional Annotations

Value Algorithm Source
Autoinducer 2-binding protein lsrB Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZE9_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 346.0
  • Bit_score: 428
  • Evalue 5.00e-117
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD78674.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 346.0
  • Bit_score: 429
  • Evalue 4.10e-117
Autoinducer 2-binding protein lsrB similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 346.0
  • Bit_score: 428
  • Evalue 1.40e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCAAGCGAGACTGAAGATTACGGTGGCGATCATCGCCGCGCTGGCGACGACCGTTGCTCTCGGGGCCTGCACGAAGAAGAACCAGACGGCAGCCCCGGCTGCCAGTGGTTCCGCCGGCGGGACCGTCAAGGTAGCGTTCGTTCCCAAGTTGCAGGGCATTCCCTACTTTGAAGCCATGAATGACGGTGGCAAGGAGGCCGCCGGCAAACTCGGCAACGTGGAGTGGCTCTACCAGGGCCCCACCAGCGCGGACGCGGCGGCACAGGCAGACATTGTCAATAGCTACATCCAGCAGAAGGTGAACACGCTGTTCATCGCTCCGAACGATCCTGACTCGATGGCGCCGCTGATCAAGCAGGGCATCGACGCCGGCATCAAGGTCGGCACCTCAGACACCGACGCCCCGAACTCTGACCGGGAGCTCATGGTGCTGATGGCGTCGGCCGAAGGCATCGGCCAGGCGGACACCGACGCCCTGATGAAGGCCATGGGTGGCAAAGGGAAGTTCGCCGTCGTGTCCTGTGGCGAGACCGCTGCCCAGCTGAACCAATGGATCGATGAGATCAAGAAGTATTCCAAGGAGAAGTACCCCGACGCTCAGTTGGTCGACACCGTCTACGCCGGTGAAGATGTTGCCAAGGCGACGCAGATGGCAACCGATCTCATGAACGCTCACCCCGATATCAAGGGATTCCTCGGGGTGTGCTCGACAGCCGGGCCGGGCGTCGCGCAGGCAGTGCAGAATGCCGGGAAGACCGGGAAGGTCTTCACCGTCGGAATGGGTACGCCGAACGACATGAAGAAGTACCTGCAGAATGGTGCAGCGTCGGCCGGCGTCTTGTGGGACGCGAAGGCTCTGGGTTGCCTGACCGCATGGGCTGGGCTGCAGTTGGCGCAGGGCAAGCAGTTCCAAGCCGCACAGCCGGTCCCTGAGTGCGGACTCGACAATGTCACCTACGACAGCGGTACCAAGATCCTGCTGATGGGTAAGCCACTGACCTATACCAAGGAGAACGTCGGGGACTACAACTTCTAG
PROTEIN sequence
Length: 346
MQARLKITVAIIAALATTVALGACTKKNQTAAPAASGSAGGTVKVAFVPKLQGIPYFEAMNDGGKEAAGKLGNVEWLYQGPTSADAAAQADIVNSYIQQKVNTLFIAPNDPDSMAPLIKQGIDAGIKVGTSDTDAPNSDRELMVLMASAEGIGQADTDALMKAMGGKGKFAVVSCGETAAQLNQWIDEIKKYSKEKYPDAQLVDTVYAGEDVAKATQMATDLMNAHPDIKGFLGVCSTAGPGVAQAVQNAGKTGKVFTVGMGTPNDMKKYLQNGAASAGVLWDAKALGCLTAWAGLQLAQGKQFQAAQPVPECGLDNVTYDSGTKILLMGKPLTYTKENVGDYNF*