ggKbase home page

PLM3_5_b1_sep16_scaffold_4229_19

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(10337..11338)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00036D6C86 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 330.0
  • Bit_score: 432
  • Evalue 3.30e-118
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EDY60391.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 314.0
  • Bit_score: 431
  • Evalue 6.10e-118
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 285.0
  • Bit_score: 357
  • Evalue 3.90e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sviceus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCAGGTGGGAGCAGTGATCGTGACATCAGTGACGGCATCCCGAGCGAGGCCCGCAGCGGCGTTCGCGGGGAGATCCAGACGTTTCTGACCACGAGACGGGCCCGGATCAGCCCCGAGCAGGCGGGTCTGCCCGCCTACGGTGGAGAGCGTCGACGGGTCTCGGGCCTGCGCCGCGACGAGGTCGCCCTCCTGGCCGGCATCTCCAGCCAGTACTACACCAAACTCGAGCGCGGCAACGCGACCGGCATCTCCGAGGGCGTTATCGACGGCATCGCTCGCGCCCTGCAGCTGGACGAGGCGGAGCGGACCCATCTGGTCGATCTGATCCGCGCCGCCGGCACCACCCGCGCACTCCGCCGGGCAGCCCCTGAGCGGGTCCGGCCCACGGTGCAACGCGTCCTCGACTCCATGATCGGCACGCCCGCCCTCGTCCTCAACGCACGCCTCGACATCGTGACCGCCAACCAGCTGGGGTTCGCGTTGTTCTCGCCGGTCTACGCCGACCCGGTCAGGCCAGCCAACAACGCCCGGTTCGTCTTCCTCGACCCGTACGCCACCGAGTTCTTCCGCGACTGGAACAAGGTCGCCAACGACACGGTCGCCATCCTGCGAGCCGAGGCCGGACGCCACCCATACGACCGGCGCCTCTCCGATCTGATCGGTGAGCTGTCTACCCGCAGCGATCAGTTCCGTCGCCGCTGGGCCGCCCACGACGTCCAAATCCACACCACCGGCGTCAAGCTGATCCACCACCCGGTCGTCGGAGACCTCGACCTGCCATACGAATCCTTTCCGCTGGCTGCCGATCTCAGCCAAAGCCTCCTCACCTACACTGCCGAGCCCGGATCACCCACACAGGACGCCCTGACCCTGCTGGCCAGCTGGGCCGCCAGCACAACGCACCCGAGCGACCAAGAGAACGAAGACCGTGGACTTGACTTGCACACCAGATCCGGCACCGACCCGACGACGCCCGAAGACGCCGGCCTCAACGACTAA
PROTEIN sequence
Length: 334
MAGGSSDRDISDGIPSEARSGVRGEIQTFLTTRRARISPEQAGLPAYGGERRRVSGLRRDEVALLAGISSQYYTKLERGNATGISEGVIDGIARALQLDEAERTHLVDLIRAAGTTRALRRAAPERVRPTVQRVLDSMIGTPALVLNARLDIVTANQLGFALFSPVYADPVRPANNARFVFLDPYATEFFRDWNKVANDTVAILRAEAGRHPYDRRLSDLIGELSTRSDQFRRRWAAHDVQIHTTGVKLIHHPVVGDLDLPYESFPLAADLSQSLLTYTAEPGSPTQDALTLLASWAASTTHPSDQENEDRGLDLHTRSGTDPTTPEDAGLND*