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PLM3_5_b1_sep16_scaffold_5404_3

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 905..1231

Top 3 Functional Annotations

Value Algorithm Source
Putative transposase (Fragment) Tax=Kineosphaera limosa NBRC 100340 RepID=K6VK57_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 86.0
  • Bit_score: 123
  • Evalue 1.10e-25
Transposase {ECO:0000313|EMBL:ETA66248.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 86.0
  • Bit_score: 127
  • Evalue 8.00e-27
integrase core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 79.0
  • Bit_score: 107
  • Evalue 1.30e-21

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Taxonomy

Amycolatopsis halophila → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGTGCACTGCGGTGTGCGAGTGCGTTGGCCGGACTCGGCCCGGCGGGCCCGGTGATGCCTTGCTCACCATGGCGGCGAACCTGCGCATCCAGATCCCCTTCACCTCGACCTCAGGGTCGTGGCTCAACCTCGTCAAGATCTGGTTCGGGATCATCGAACGCCAAGCCACCCACCGCTGCACCTTCGCCTCGGTCCGCGAGCTGATGATCAAGATCCGTACCTTCATCAACGGCTGGAACGACCGCTGCCACCCCTTCATCTGGACCAATGACCAGACCCTCAAGAAAGCCAACCGTCAAACAACTCAAGTTGCGGTCCACAAGTGA
PROTEIN sequence
Length: 109
MCTAVCECVGRTRPGGPGDALLTMAANLRIQIPFTSTSGSWLNLVKIWFGIIERQATHRCTFASVRELMIKIRTFINGWNDRCHPFIWTNDQTLKKANRQTTQVAVHK*