ggKbase home page

PLM3_5_b1_sep16_scaffold_303

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_303_1
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1304
DNA (1302bp) protein (434aa)
Thymidylate kinase-like protein bin=GWB2_Proteobacteria_55_19 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM3_5_b1_sep16_scaffold_303_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1307..2494
DNA (1188bp) protein (396aa)
Glycosyl transferase, group 1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J3J5_DEIGD
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_5_b1_sep16_scaffold_303_3
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2491..3759
DNA (1269bp) protein (423aa)
membrane protein Tax=Streptomyces RepID=UPI000364F71A
Integral membrane protein {ECO:0000313|EMBL:EFL36555.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
membrane protein
PLM3_5_b1_sep16_scaffold_303_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3771..5291)
DNA (1521bp) protein (507aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KW3_RHOP5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_5_b1_sep16_scaffold_303_5

Not on your lists

5334..7358
DNA (2025bp) protein (675aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037C9ADD
Uncharacterized protein {ECO:0000313|EMBL:KKM06322.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
polysaccharide deacetylase
PLM3_5_b1_sep16_scaffold_303_6
unknown

Not on your lists

7361..8785
DNA (1425bp) protein (475aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_303_7
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8782..9669
DNA (888bp) protein (296aa)
Polysaccharide deacetylase {ECO:0000313|EMBL:EMI21120.1}; EC=3.-.-.- {ECO:0000313|EMBL:EMI21120.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
Polysaccharide deacetylase Tax=Rhodopirellula maiorica SM1 RepID=M5RP98_9PLAN
polysaccharide deacetylase
PLM3_5_b1_sep16_scaffold_303_8
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9684..10856
DNA (1173bp) protein (391aa)
Glycosyl transferase group 1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKN7_RHOMR
group 1 glycosyl transferase
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_5_b1_sep16_scaffold_303_9
unknown

Not on your lists

comp(10823..12385)
DNA (1563bp) protein (521aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_303_10
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12611..13678
DNA (1068bp) protein (356aa)
Cellulose biosynthesis (CelD)-like protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PI87_9DELT
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_5_b1_sep16_scaffold_303_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13845..14975
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B52444
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_5_b1_sep16_scaffold_303_12
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14983..15801
DNA (819bp) protein (273aa)
Monooxygenase FAD-binding Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZB48_METPB
monooxygenase
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACB79283.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Displaying 12 items

View Taxonomy