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PLM3_5_b1_sep16_scaffold_3056_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 3523..4140

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR Tax=Frankia sp. CN3 RepID=G6H7R4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 200.0
  • Bit_score: 141
  • Evalue 5.50e-31
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KJE25210.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 185.0
  • Bit_score: 131
  • Evalue 1.40e-27
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 189.0
  • Bit_score: 125
  • Evalue 8.90e-27

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGACGCTGGCCCCGACGAGCACCGACCGTGGCTCCGAGACCCGCCGCCGCATCCTGGAGGTGGCCGCCGAGGCCTTCGCCGACCGCGGCTACGCCGGCACCTCGGTCAACGACGTGCTCAAGGCCAGCGGTGTCACCAAGGGCGGCTTCTACTTCCACTTCCCGTCCAAGGAGGCGCTGGCCCTGGCCACCCTCCGGCACAAGCAGGAGCAGTGGGCCGGGATGGTGATGGCGGCCGTGATGCGCCGGCCGCGGGCCGTCGAGCAGCTCGAGGCCATGGTCGACGCGCTCTGCGACCTGCACGAGCAGGACCGTGCGTGCCGTGCCATCAGCCGGCTCTGCACCGAGCTGGGCGACGAGCGCCCCGAGCTGCGCCCGCAGCTCGGCACCCAGCTCACCACCTGGATGGACATGGTCGCGGCGATCATCCGCAAGGGCCAGGACGAGGGCGAGATCCGGCCCGACGTCGAGCCGGCGGTGGCGGCCGAGATCGCGGTCGAGTCCTTCATCGGCCTGGAGACCGTCTCCGAGATCCTGACCGGCCGTGCCGACCTGCGCCGGCGGGCCAGGGACTTCCGCGACCTGTGGTTCGCGGCCATCCGCCAGCCCACCACCTGA
PROTEIN sequence
Length: 206
MTLAPTSTDRGSETRRRILEVAAEAFADRGYAGTSVNDVLKASGVTKGGFYFHFPSKEALALATLRHKQEQWAGMVMAAVMRRPRAVEQLEAMVDALCDLHEQDRACRAISRLCTELGDERPELRPQLGTQLTTWMDMVAAIIRKGQDEGEIRPDVEPAVAAEIAVESFIGLETVSEILTGRADLRRRARDFRDLWFAAIRQPTT*