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PLM3_5_b1_sep16_scaffold_3300_7

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(5917..6438)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, extracellular solute-binding protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L2P8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 171.0
  • Bit_score: 200
  • Evalue 1.10e-48
Extracellular solute-binding protein {ECO:0000313|EMBL:EWM64061.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 201
  • Evalue 7.00e-49
family 1 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 199
  • Evalue 7.00e-49

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
CGCGACGACAAGACGTTCCTTGCCCAGAACAGCGGTGTCGTCACCGCCATCAAGGGGCCCAGCGGCGCCGAGCCGACCCAGTTCGGTGAGGTCACCAACTTCTCGATCATCAAGGACGGCAACACCGAGCCGGCCAAGAAGTTCGTCGAGTACATGATGAGCGACGGCTACATCAGGTGGCTCTCGTTCGCGCCCGAGGGCAAGTTCCCCGTCCGGGCCGGCACCAAGGACAACCCCCAGGAGTACATCGACGCCTGGAACAAGCTCGAAGCCGGTGTCGACACCAAGGCGCCGCTCTCCGACTTCTATCCCCCAGAGGTGCTGACGGCCCTGACCAAGAGCACCGACACCATGAGCCGCTGGGGCTTCGAGCAGGGCCAGGGCCGCCTGGTCGGCGCCCAGCTGGCCGAGCTGCCCATCCCCAAGGCGCTGGCGTCGGAGATCTCGGGGAAGCTGACCGCGGACGCGGCGGCCAAGCAGGCCCAGGCCGACGTCGAGGAGATCGCGCAGTCGATCCAGTAA
PROTEIN sequence
Length: 174
RDDKTFLAQNSGVVTAIKGPSGAEPTQFGEVTNFSIIKDGNTEPAKKFVEYMMSDGYIRWLSFAPEGKFPVRAGTKDNPQEYIDAWNKLEAGVDTKAPLSDFYPPEVLTALTKSTDTMSRWGFEQGQGRLVGAQLAELPIPKALASEISGKLTADAAAKQAQADVEEIAQSIQ*