ggKbase home page

PLM3_5_b1_sep16_scaffold_3963_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 2282..2626

Top 3 Functional Annotations

Value Algorithm Source
Anti-sigma factor antagonist Tax=Frankia sp. CN3 RepID=G6HJ69_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 111.0
  • Bit_score: 180
  • Evalue 7.80e-43
anti-sigma-factor antagonist similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 111.0
  • Bit_score: 179
  • Evalue 4.90e-43
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 111.0
  • Bit_score: 179
  • Evalue 1.90e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sp. RSD-27 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGATCTCGACCTCAACGTGCACAAGGAAGGCGACCACTCGGTGCTCGAAGTGGCCGGCGAGATTGACGTCTACACCGCGCCAAAGCTGCGCGAGCAGCTGATCGAGCTGGTCAGCGACGGGTCCTACCACATCGTGGTCGACCTGGAGAAGGTCGACTTCCTGGACTCGACCGGGCTCGGGGTGCTGGTCGGCGGGCTCAAGCGGGTCCGCAACCACGACGGCTCGCTGCAGCTTGTCTGCACCCAGGAGAAGATCCTCAAGATCTTCCGGATCACCGGGCTGACCAAGGTCTTCCCGATCCACAGCTCGGTCGCCGACGCCATCTCGGCCCCGGTCGAGTAG
PROTEIN sequence
Length: 115
MDLDLNVHKEGDHSVLEVAGEIDVYTAPKLREQLIELVSDGSYHIVVDLEKVDFLDSTGLGVLVGGLKRVRNHDGSLQLVCTQEKILKIFRITGLTKVFPIHSSVADAISAPVE*