ggKbase home page

PLM3_5_b1_sep16_scaffold_4553_3

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2570..3172)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family protein Tax=Streptomyces griseoflavus Tu4000 RepID=D9XNW4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 212.0
  • Bit_score: 166
  • Evalue 1.60e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 219.0
  • Bit_score: 163
  • Evalue 3.80e-38
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 186.0
  • Bit_score: 189
  • Evalue 4.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCTCGAGCTGGCCGTGCTTGGGCTGCTCAAGGAGACACCGATGTCTGGCTACGAGCTGAAGAAACAGCTCTCGGTCAAGCTCGGGGCCTTCTGGCGAGTCAGCTATGGCTCTCTGTACCCGTGTCTCAAGCGGCTGGCCGCCGACGGGACCCTGGACGTCGAGGTCTCGCCGTTCACCTCACGCAAGAAGCACGTCTACCGGTTGACCGACAAGGGCAACCGGCTGTTCCACCAGCTCCTCGAGACGGCCGACGGCCACGAGCTGGAGCAGGACCGGTTCTCCATGCGACTGGCCTTCTTCCGCTACCTGCGGCCGGAGGCCCGCCTCTACCAGCTCGAGCGGCGGCGCGGCTACCTCCAGGAGCGGCTGGCCGACCTGCGTGCCTCGGTGCGGACAGCCCGCGAGCGCATGGATGCCTACACCATCGAGCTGATGGACCACGGGCTGGACGAGCGCGAGCGCGAGATCGCCTGGCTCGACCGTCTGATCGCCCGCGAGCGGCGCTCCACCGAGGGCGCCGACGAGCAGGACCCGGCTGGGCCCCCGGCCCAGCTTCCCCAGTCACCGCGCGACCCCCGCCTTCCCGCACAGACCGGGTAG
PROTEIN sequence
Length: 201
VLELAVLGLLKETPMSGYELKKQLSVKLGAFWRVSYGSLYPCLKRLAADGTLDVEVSPFTSRKKHVYRLTDKGNRLFHQLLETADGHELEQDRFSMRLAFFRYLRPEARLYQLERRRGYLQERLADLRASVRTARERMDAYTIELMDHGLDEREREIAWLDRLIARERRSTEGADEQDPAGPPAQLPQSPRDPRLPAQTG*