ggKbase home page

PLM3_5_b1_sep16_scaffold_3837_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(4171..5481)

Top 3 Functional Annotations

Value Algorithm Source
Putative peptidase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7S2_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 436.0
  • Bit_score: 427
  • Evalue 1.40e-116
Peptidase U62 family protein {ECO:0000313|EMBL:KGA12417.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 431.0
  • Bit_score: 436
  • Evalue 2.50e-119
putative Zn-dependent protease-like protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 432.0
  • Bit_score: 419
  • Evalue 8.30e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

actinobacterium acAcidi → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
GACCGCCTGTCCCACAACATCCGGCTCGAGGACCGGCGGGTCGAGGAGCTGGTCACCGGCCGCGACCGCGGCGCCGGGGTCCGGGTGGTGAAAGGCACGGCCTCGGCCTACGCCTACACCAACCGCCTGGACACCGACGCCCTGCTGGAGGCGGCCCGGGTGGCCGCGGCCGCCCTCCGCGAGCCGCCGGCGGCCCAGGTGGCGGACCTGCGGCGCCGCGAGCCGGGGGTGCGCCACCCGGTGGCGGTCGACCCGGCCGGCGTCCAGCGGACCACCCTGGCCGAGCTGGTCCGGGTGGCCGACGACGCCGCCCGTGGCTACGACCCAGCCGTGGCCCAGGTCACCGCCGCCTACGGCGACGTCCGCCAGCAGGTCATGATCGCCAACTCCGAGGGGTTCTCGACCCTCGAGGACCGGGTCCGCACCCGCCTGGTGGTCCAGGTGGTGGCGGTCCGCGGCGGCGTCGTCCAGACCGGCTTCGACGGCCCCGGCCGCTCCATGGGCTTCGAGCTGCTCGACCAGTTCCCCCCCGAGGAGGTGGCCCGGCGGGCGGCCGAGCGGGCCGTGGCCATGCTGGACAGCAAGCCCGCCCCGGCCGGCCAGATGCCGGTGGTGATCGCCTCCGGCAACGGCGGGGTGCTGTTCCACGAGTCGTCCGGCCACGGCATGGAGGCCGACCTGATCGCCAAGGAGGCCTCGGTCTACACCGGCAAGCAGGGCGCACGCATCGGGGACGAGCGCTTCAACGGGGTCGACGACGCCACCGTCGAGGGCGCCTGGGGCTCGTTCGCCTTCGACGACGAGGGCACCCCGGCCCAGCGCACGGTCCTGTTCGACGGCGGGGTCTGCACCGACTACCTGACCGACCTGATCCGGGCCAGGCAGCTCGGCCTGCCGGCGTCCGGCAACGGCCGCCGCCAGTCCTATGCCGACGTGCCGATCCCGCGCATGACCAACACCTATGTGCTGGCCGGCGGCGACGACCCCGAGGAGATCATCCGCCAGACCCCGCATGGGCTGTACGCCAAGTCGCTCGGCGGCGGCCAGGTCAACCCGGTCACCGGCGAGTTCGTGTTCGGGGTGGTCGAGGGCTACCTGATCGAGAACGGCGAGGTGACCACCCCGGTGCGCGGGGCCAACCTGGTCGGCGACGGGCCCAGCGTGGTCGCGGCCGTCGACGCCCTCGGCGACGACTTCACCGTCAAGGAGGGCATCTGCGGCAAGGAGGGCCAGGGCGTGCCGGTCGGCAACGGCGCCCCGACCATGCGCATCTCCCAGATGACCGTCGGGGGCACAGGAGGGACGGCATGA
PROTEIN sequence
Length: 437
DRLSHNIRLEDRRVEELVTGRDRGAGVRVVKGTASAYAYTNRLDTDALLEAARVAAAALREPPAAQVADLRRREPGVRHPVAVDPAGVQRTTLAELVRVADDAARGYDPAVAQVTAAYGDVRQQVMIANSEGFSTLEDRVRTRLVVQVVAVRGGVVQTGFDGPGRSMGFELLDQFPPEEVARRAAERAVAMLDSKPAPAGQMPVVIASGNGGVLFHESSGHGMEADLIAKEASVYTGKQGARIGDERFNGVDDATVEGAWGSFAFDDEGTPAQRTVLFDGGVCTDYLTDLIRARQLGLPASGNGRRQSYADVPIPRMTNTYVLAGGDDPEEIIRQTPHGLYAKSLGGGQVNPVTGEFVFGVVEGYLIENGEVTTPVRGANLVGDGPSVVAAVDALGDDFTVKEGICGKEGQGVPVGNGAPTMRISQMTVGGTGGTA*