ggKbase home page

PLM3_5_b1_sep16_scaffold_5385_7

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(5028..5216)

Top 3 Functional Annotations

Value Algorithm Source
alpha-amylase Tax=cyanobacterium PCC 7702 RepID=UPI00037416CA similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 49.0
  • Bit_score: 68
  • Evalue 1.40e-09
Alpha-amylase {ECO:0000313|EMBL:KIZ46476.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 59.0
  • Bit_score: 70
  • Evalue 5.10e-10
trehalose synthase-like protein similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 43.0
  • Bit_score: 67
  • Evalue 1.10e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
GAGCTCGACCTGTCCCGGTTCCACGGCCTGGTGCCCGAGGAGATGTTCGGCCGGACCCCGTTCCCGGTGATCGACGACGAGCCCTACCGCCTCGGCCTCGGCCCCCACGGCTTCTACTGGTTCCACCTGGTCGAGCCGCCGGCCCAGCCGGACGACACGGCCATGTTCCGGGCCATCCGCACCCGTTGA
PROTEIN sequence
Length: 63
ELDLSRFHGLVPEEMFGRTPFPVIDDEPYRLGLGPHGFYWFHLVEPPAQPDDTAMFRAIRTR*