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PLM3_5_b1_sep16_scaffold_7481_6

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 4019..5491

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 491.0
  • Bit_score: 791
  • Evalue 1.20e-226
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 491.0
  • Bit_score: 791
  • Evalue 5.80e-226
DNA-directed RNA polymerase subunit beta' Tax=Thermobifida fusca RepID=RPOC_THEFY similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 491.0
  • Bit_score: 791
  • Evalue 4.20e-226

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Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
GTGCTCGACGTCAACTACTTCGACGAGCTGCGGATCGGCCTGGCCACGGCCGAGCAGATCCGCATGTGGTCAAACGGCGAGGTCCGCAAGCCGGAGACGATCAACTACCGGACCCTCAAGCCCGAGAAGGACGGCCTGTTCTGCGAGAAGATCTTCGGGCCGACGCGGGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCATCTGTGAGCGCTGTGGCGTCGAGGTCACCCGGGCCAAGGTGCGGCGCGAGCGCATGGGCCACATCGAGCTGGCCGCGCCCGTCACCCACATCTGGTACGTCAAGGGTGTGCCGAGCCGGCTCGGCTACCTGCTCGACATGGCCCCCAAGGACCTCGAGAAGATCATCTACTTCGCGGCCAACGTGGTGACCTGGGTCGACGACGACCGCCGTCACGACGACCTGCCCCGGGTCGAGACCGAGCTGGCGCACGAGCGCGAGCAGGTCGAGGTCGACAAGCAGAAGCGCGAAGAGGAGATCAAGGCCCAGCTGGAGGCCAACCTGGCCGAGCTGGAGGCCCAGGGGGCAAAGTCCGACCAGCGCCGCAAGGCCCGCAACGAGGCCGAGCGGGCGTTCAAGGACGTGCGCGAGAAGGCCGCGACCCGGGTCGAGCTGCTCGAGCGCATCCTCGACGTGTTCAAGAACATGTCGCCCAAGCAGCTGCTGGCCGACGACCAGTACTACCGCGAGCTGCGTGACCGCTTCGGCGAGTACTTCTCGGCCGGCATGGGCGCCGACGCCATCAAGGATCTCCTCTTGCGCGAGGGGGTCGAGGAGGAGCAGGCCCGCCTGCGCGAGGTCATCGCCACCTCCAAGGGCCAGAAGCAGCAGCGGGCCATCAAGCGGCTGCGGGTCGTCTCGGCCTTCATCGGCCGGCGCAACTCGCCGCTGGGCATGGTGCTCGACTGCGTCCCGGTGATCCCGCCCGACCTGCGCCCGATGGTGCAGCTGGACGGCGGCCGGTTCGCCACCAGCGACCTGAACGACCTGTACCGGCGGGTCATCAACCGCAACAACCGCCTCAAGCGGCTGCTGGACCTGGGCGCGCCCGAGATCATCGTCAACAACGAGAAGCGCATGCTCCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGCGGCCGCCCGGTCACCGGGCCCGGCAACCGGCCTCTCAAGAGCCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGGGTCGACTACTCGGGCCGCTCGGTCATCGTGGTCGGTCCCGAGCTGAAGCTGCACCAGTGCGGGCTGCCCAAGCAGATGGCCCTTGAGCTGTTCAAGCCGTTCGTGATGAAGCGGCTGGTCGACCTGTCGTACGCGCAGAACATCAAGTCGGCCAAGCGCATGGTCGAGCGTTCCCGGCCTCAGGTCTGGGACGTGCTCGAGGAGGTCATC
PROTEIN sequence
Length: 491
VLDVNYFDELRIGLATAEQIRMWSNGEVRKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYVKGVPSRLGYLLDMAPKDLEKIIYFAANVVTWVDDDRRHDDLPRVETELAHEREQVEVDKQKREEEIKAQLEANLAELEAQGAKSDQRRKARNEAERAFKDVREKAATRVELLERILDVFKNMSPKQLLADDQYYRELRDRFGEYFSAGMGADAIKDLLLREGVEEEQARLREVIATSKGQKQQRAIKRLRVVSAFIGRRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKQMALELFKPFVMKRLVDLSYAQNIKSAKRMVERSRPQVWDVLEEVI