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PLM3_5_b1_sep16_scaffold_12933_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2194..3036)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic Tax=Thermoanaerobacterium RepID=I3WBP1_THESW similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 299.0
  • Bit_score: 99
  • Evalue 5.60e-18
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 299.0
  • Bit_score: 99
  • Evalue 1.60e-18
Hydrolase Nlp/P60 {ECO:0000313|EMBL:KIA60839.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 137.0
  • Bit_score: 87
  • Evalue 3.10e-14

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Taxonomy

Nocardia vulneris → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ACCTGGCAGGTGCTGGCGGCCATCGGCAAGATCGAGTCCGACCACGGCCGCTCCTCGGCCCCCGGGGTCCGCGACGGCATCAACCGCGCCGGCTGCTGCGCCGGGCCCATGCAGTTCAACCTCACCAACGGCCCGCCCAGCACCTGGGACACCTGGGGGACCGGGGTGCGGGCCCAGGTCTACGACCCGGCCCACGCCGTCCCGGCGGCCGCCCGCAAGCTGTGCGGCGACGGCCTGGCCCGCCCCGAGGCCGTCGGCCGCGACCCCTGCCCCCAGGTCCTGGGCTCGGCCGCCCTTCACACCGCCCTTCGCCGTTACAACAACGCCTGCTGGTACGTGCACGAGGTGGTGACCCTGGCCGGCCGCTACACCAGGGCAGCTCCCGCCCCGGCCCCGGCGCGCGACCCGTTCGTCCGCGCCCTGGTGGCCAGCCCGCGGATCACGACCACGGCCAGCCACGGCTGCGACCCGGCCGCCGACCTGGCCTCCGGACGGCTCGACCTCCGGGTCCAGTCCCTGCTGGCCGTCCTGGCCGACCGCCACGCGATCCGCCTCAGCTGCCTGCGCACCGGCCATTCCCGGTTCGTCAAGGGCACCACCCGGGTCTCCAACCACACCGTCTGGCGGGCGGTCGACATCGACATGGTCGACGGCCGCCCGGTCAGCCGCCGCAGCCAGCCCGCCCGCGCCCTGGCCCTGTGGCTGGACGGCCTCCAGGGCCCCCTGCGCCCGGCCGAGATCGGCTCCCCGTTCCCCTTCGCCCGCCGCCCCTACTTCACCGACGAGGGCCACCAGGGCCACATCCACATCGGTTACAGCTACCTGTCCCCGGGGGCGCCGTAG
PROTEIN sequence
Length: 281
TWQVLAAIGKIESDHGRSSAPGVRDGINRAGCCAGPMQFNLTNGPPSTWDTWGTGVRAQVYDPAHAVPAAARKLCGDGLARPEAVGRDPCPQVLGSAALHTALRRYNNACWYVHEVVTLAGRYTRAAPAPAPARDPFVRALVASPRITTTASHGCDPAADLASGRLDLRVQSLLAVLADRHAIRLSCLRTGHSRFVKGTTRVSNHTVWRAVDIDMVDGRPVSRRSQPARALALWLDGLQGPLRPAEIGSPFPFARRPYFTDEGHQGHIHIGYSYLSPGAP*