ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM3_5_b1_sep16_scaffold_14504_6

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2840..4264)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 501.0
  • Bit_score: 391
  • Evalue 1.30e-105
Periplasmic sensor signal transduction histidine kinase Tax=Frankia sp. (strain CcI3) RepID=Q2J924_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 501.0
  • Bit_score: 391
  • Evalue 9.30e-106
periplasmic sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 501.0
  • Bit_score: 391
  • Evalue 2.60e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
TTGCTTCGCGGGGTCGAGGAGGACCTCGCCGGCGACGTCGACGCGGCCGCCGCTGCGGTCGAGGCCGGCGGCAGCCGCCGGGCCCTGATCTATACGGTCATCTTGACGGTCCTCTTGTGGTTAACGGTCGGCCTAGTACTGCTGATGGCCCGCTCCATGGTCCAGCCGCTGCGGACCCTGACCGACACCGCCAACGAGGTCGCCGACCACCAGCTGCCGGGCCTGGTCGAGCAGTTGCAGCACGCCAAGGACCCACGCGATCTCCACGTCGTCCCCGAACCGGTCCCGGTGACCTCAACCGACGAGATCGGCCAGGTGTCGGCCGCCTTCAACTCGGTCCACCGCACCGCTATCGAGGTCGCCACCGAGCAGGCCGCGCTGCGCAAGTCGATCGGCGACATGTTCCTCAACCTGGCCCGGCGCAGCCAGAGCCTGATCGACCGCCAGCTCGAGCTGATCGACGACCTGGAACGCGAGGAGACCGACCCCGACACCCTGGAGAACCTCTTCCGGCTCGACCACCTGGCCACCCGGATGCGCCGCAACTCCGAGGACCTGATCGTCCTCTCGGGAGAAGCACCGCCCCGCCGCTGGAGCCAGCCGATGCCGCTGGACGAGGTCGTCCGGGCCGCTGTGGCCGAGGTCGAGGACTACAACCGGGTCGAACTGCTGCCGATCGACGACATCGGGCTGGCCGGCCAGGCGATCAGCGACGTCGTCCACCTGCTGGCCGAGCTGATCGAGAACGCCACCTCGTTCTCGCCCCCCGGGACCAAGGTCCAGATCGCCGGCCAGTCGATCTCCAGCGGCTATGTGCTCGAGATCGAGGACCGCGGCCTCGGCATGACCGACGACGAGCTGGTCGAGGCCAACGAGCGCCTCGCCAACCCGCCCATTGTCGACTTCGCCCTCTCGCGCATGCTGGGGCTGTACGTGGTCGCCCGGCTGGCCCAGCGCTACAACATCAAGGTGCAACTGCGGCACTCCTGGTACGGGGGCGTCACCGCCTTAGTGCTCCTGCCGCTGGGCCTAACGGTGCAGGCCCCGGTTCCCGAGTCGTTGGAGGCGGCCCAGAACGGCGGCCATCGGCCACAGCTGGCCCCGCCGGCTCGGCCCAACTTGGACGGCGCTCCAGTCCAGGTAGCCCAGCCGGTGGCTGCGCCGCCTTCCCCCTCTCAAGACCCCGGGGACGGTCAACCCGGCGGCAACACCCCGATCTTCGAAGCAGCCCGCTCCGACTGGTTCGAGGACGAAGACATTCACCGAGACCATCTGCCGCTCCGGCGCCACGGGGCCGAGCAGCCACACACGGTGCCGGAGGAGGCATATTGGGCCGTCGGCGCCGGACCCGAGCCGCCGCCCACCAGCGCGGCCGATCCCCCACAGCAACCGCCGCCCACCCCCCGGCGCCGGAGACGCCGTTGA
PROTEIN sequence
Length: 475
LLRGVEEDLAGDVDAAAAAVEAGGSRRALIYTVILTVLLWLTVGLVLLMARSMVQPLRTLTDTANEVADHQLPGLVEQLQHAKDPRDLHVVPEPVPVTSTDEIGQVSAAFNSVHRTAIEVATEQAALRKSIGDMFLNLARRSQSLIDRQLELIDDLEREETDPDTLENLFRLDHLATRMRRNSEDLIVLSGEAPPRRWSQPMPLDEVVRAAVAEVEDYNRVELLPIDDIGLAGQAISDVVHLLAELIENATSFSPPGTKVQIAGQSISSGYVLEIEDRGLGMTDDELVEANERLANPPIVDFALSRMLGLYVVARLAQRYNIKVQLRHSWYGGVTALVLLPLGLTVQAPVPESLEAAQNGGHRPQLAPPARPNLDGAPVQVAQPVAAPPSPSQDPGDGQPGGNTPIFEAARSDWFEDEDIHRDHLPLRRHGAEQPHTVPEEAYWAVGAGPEPPPTSAADPPQQPPPTPRRRRRR*