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PLM3_5_b1_sep16_scaffold_16290_1

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 2..1432

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbA Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B53B9C similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 496.0
  • Bit_score: 181
  • Evalue 1.10e-42
Conjugal transfer protein TraA {ECO:0000313|EMBL:KKC24095.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 492.0
  • Bit_score: 183
  • Evalue 5.40e-43
conjugal transfer relaxase TraA similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 435.0
  • Bit_score: 174
  • Evalue 5.10e-41

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Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
GACAACAGGACGGTGCTGGTGGTGGATGAGGCCGGCATGCTGGGCAGCCGCAAGCTGGCCCGCCTCCTCGACCACGCCTCCCAGGCCCAGGCCAAGGTGGTGCTGGTCGGCGATGATCGGCAGCTGGCCGCGATCGACGCCGGCGGTGGCTTCCGCGCCCTTCGGCTCCGCCTCGGCGCCAGCGAGCTGACCGAGAACCGCCGCCAGCACCAAGCCTGGGAACGCGAAGCCCTCGACCTCGTCCGAAGCGGGCTGGTCGAGGAGGCGGTGGCCGCCTACCAGGCCCATGACCGGATGGTGGCCGCCGACTCCAAACCCGCCGCCACCCTCGCCCTGCTCCAGGACTGGTGGGTGGCCTGGCAGCAGGCCGAACAGGACCCGGCCCACGAGGTCGTGGTGCTGGCCGCCCGGCGAGCCGAGGTCGACCGGCTCAACACCGCCTGCCAGGAGCTCCTGGCCGCCCGGGGCCGCCTCGGAGGGGAGCGGCTTCTGGTCGAGGACCGCCAGCTGGCCGTCGGCGACAAGGTCGTCTGCGGCCACAACGCCATCGGCGAGCTCGGGGTGGCCAACGGCAGCCGCGGCACCATCACCGCCCTCGACCCCCACGCCCGGAGACTAATCATCCGCCTGGACAGCACCGACGGCCGGACGGTCATCTTGCCCCGGTCGTATCTGGATGGCCGCGGCCGCGGCGAGCGCAACCGGCGAGTGGATTTGGCCTATGCCACCACCGGCCACCGGGCTCAAGGGCTGACGCGGGGGCGGGCCCTGGTCCGCCTCACTGGCACCGAGGACGTCAACTGGCTCTATGTGCAGCTGTCCCGCGCCAAGAATGAGACCACGCTGTATGCGGTGGTCGGCCCCGAACCCCAAGGTCCAGCGGAGCTGGACCTGCCCGATCGGGAGGTCGGTGACGGTTACGCCCAGCTGGCCCAGGCCCTGTCCCGTGCTGGCGACCAGCGCTTGGCGATCGACACCACTAGCAGCCTGGATCTGCGGCGGCTGTCAACGGGAGAGCTACGGGCCGAGCGGGACCGGCTCCGGAGCCGCGCCAGGCGCAGGCGATGCTTCGTCTGCGCTGGCGGGCCAGGCTGGCCGGCGCCGACCCAGGGCCCGTGGCGGTGGCTCGCCAGCAGGCCGACCGCGCCCACGACACCGAGCTCAAGCTGCGCCGGCATCAGCAGCGCCGGGCGGGCTGGCTGGAGGCCAACGCCCACCTCGGCCCCGCCTACCGCCAAGTCGTCCGGGAGCTGGCCTGGCAGCGCCGGGCCCGCGGCTTGGCCGCCGAGCACGACCGGCCCGGCTACTTCCGGGGCGAGCTTGGCCCGGTCCCCGAGAGCACTAGGGGGCGGCGGGCCTGGCGGCGGGCCGCGGCCGCCATTGAGGACTACCGCCGCAGTTATGGCATCACCGACCCCGAGAAGGCGCTAG
PROTEIN sequence
Length: 477
DNRTVLVVDEAGMLGSRKLARLLDHASQAQAKVVLVGDDRQLAAIDAGGGFRALRLRLGASELTENRRQHQAWEREALDLVRSGLVEEAVAAYQAHDRMVAADSKPAATLALLQDWWVAWQQAEQDPAHEVVVLAARRAEVDRLNTACQELLAARGRLGGERLLVEDRQLAVGDKVVCGHNAIGELGVANGSRGTITALDPHARRLIIRLDSTDGRTVILPRSYLDGRGRGERNRRVDLAYATTGHRAQGLTRGRALVRLTGTEDVNWLYVQLSRAKNETTLYAVVGPEPQGPAELDLPDREVGDGYAQLAQALSRAGDQRLAIDTTSSLDLRRLSTGELRAERDRLRSRARRRRCFVCAGGPGWPAPTQGPWRWLASRPTAPTTPSSSCAGISSAGRAGWRPTPTSAPPTAKSSGSWPGSAGPAAWPPSTTGPATSGASLARSPRALGGGGPGGGPRPPLRTTAAVMASPTPRRR*