ggKbase home page

PLM3_5_b1_sep16_scaffold_17306_6

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 5698..6345

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARS2_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 193.0
  • Bit_score: 130
  • Evalue 1.70e-27
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 193.0
  • Bit_score: 130
  • Evalue 4.90e-28
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABG05906.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 193.0
  • Bit_score: 130
  • Evalue 2.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGTCACAAGGCTCAGCCGATCCCAGCGGCAGGAACAGACCCGCGCCCAGCTCCTCGATGCGGCGCTGCGGGTCTTTCTCCGGCGGGGATTCCATGGGGCGTCGCTGGACGAGATCGCGGAGGAGGCCGGGTACACGACCGGGGCGGTGTACTCGAACTTCAAGGGCAAGGACGACCTGTTCCTGGCCGTGCTGGAGGCCGAGGCCCATCGGCGGTTCCCCTTGCACAGCGTGCTGATGCTGGACGCCTCCTCGATCGAGGAGGGGCTGCGGGCCAGCGCCCGCGAGATGGCCCAGTACGCCCGGGAGCACCCGGGGTGGACAGGCGTGTACGTGGAGTTCTGGACCCACGCATCGCGGCGGCCCGAGCTCCGGGCGAAGGTCGCCGCGCAGCACGAGCGGCTGCTGGCCACGGTGGGCGGGCTGGTCGCGGAGTGGGCCAGTCGCTGGGGGGTGGAGTTCACACTGCCGGCCCGGGAGGTCGTCCGTGGGGTCTACGCGATCAGCCGAGGCCTGGGGCTGGAGGCCCTGCTGGCCGACGACACAGGGACGCTGGACCCGTTCGAGGAGATGTTCCTGGTCTATGTGATGGGCCTGATCAGGGCGCGGCCCGGCACGGGGGCGCCCGGGGAGGGGAGGCTCCCATGA
PROTEIN sequence
Length: 216
MVTRLSRSQRQEQTRAQLLDAALRVFLRRGFHGASLDEIAEEAGYTTGAVYSNFKGKDDLFLAVLEAEAHRRFPLHSVLMLDASSIEEGLRASAREMAQYAREHPGWTGVYVEFWTHASRRPELRAKVAAQHERLLATVGGLVAEWASRWGVEFTLPAREVVRGVYAISRGLGLEALLADDTGTLDPFEEMFLVYVMGLIRARPGTGAPGEGRLP*