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PLM3_5_b1_sep16_scaffold_18643_2

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 648..1412

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B559C6 similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 189.0
  • Bit_score: 104
  • Evalue 9.30e-20
GAF domain-containing protein {ECO:0000313|EMBL:EIV95297.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 225.0
  • Bit_score: 102
  • Evalue 5.00e-19
transcriptional activator protein traR similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 225.0
  • Bit_score: 101
  • Evalue 2.90e-19

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGATGGAGGGGGATGACCGGCTGGTTGACCGGGACGCCTTTGCCGGCAGCCCGGGTGGGTCGCCCCGGGCTCTTCCCGATCCTGGGGGCCTGTTCGCGACCCTGCAGCGGGTCATTGACGCCACCCGGGAGGTGTTCCAGGTGGACGGGGCGAGCCTGGCGCTGGAGCACGAGGACGGCTCGCTGCGCTGGGTGGTGGTCACCGACGGCGCCGCCGGGCTGCTGGAGGACACCCAGCGTGACCTTGGCGAGGGACCCGGCCTGGCCGCCTATGGCGACTCGGTGGCCGTGGTGGTCCTCGACCTGGCCACCGACCGCCGCTTTGCTCGGCTGGCCGCGGTCGTAACCCCACGAGGGTTGCGCGGGGTGCTTGCCGTGCCGGTGGTGGTTGCCGGCCGGCCGGTGGGGGCGCTGTCGGTGTCTGCCACCGAGCCGTGTCCCTGGTCGGGCATTGACGTTGCTGCGGTGGACGCCTACGCGGAGCTGGTGCGAGCCAGCATGGCGCTGGGCGCCCGGGACGCCGAGGTGGCCGAGCTGACCCAGGCGTTGACCGCTCGGGTCTGGGTGGAGCAGGCCAGGGGGGCGCTGGTGGCGACCGAGGGGCTTGACCTGGCCGCGGCCGGCGAGCGGCTGCGCGCCCGCGCGGGGCGTCGCAGCGTACCGTGGCCGAGGTGGCCCGGGAGGTGGTGCAGGACGCCAGCGGGACCGGACCGCGGTGATCGCGGCCGAGCGGGCTCGCTCCCGGGCAGCCGAGGCCCGGGCTGA
PROTEIN sequence
Length: 255
MMEGDDRLVDRDAFAGSPGGSPRALPDPGGLFATLQRVIDATREVFQVDGASLALEHEDGSLRWVVVTDGAAGLLEDTQRDLGEGPGLAAYGDSVAVVVLDLATDRRFARLAAVVTPRGLRGVLAVPVVVAGRPVGALSVSATEPCPWSGIDVAAVDAYAELVRASMALGARDAEVAELTQALTARVWVEQARGALVATEGLDLAAAGERLRARAGRRSVPWPRWPGRWCRTPAGPDRGDRGRAGSLPGSRGPG*