ggKbase home page

PLM3_5_b1_sep16_scaffold_19301_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 2288..2521

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega Tax=Amycolatopsis RepID=UPI000262555C similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 63.0
  • Bit_score: 83
  • Evalue 6.70e-14
rpoZ; DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 63.0
  • Bit_score: 83
  • Evalue 1.90e-14
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 63.0
  • Bit_score: 97
  • Evalue 4.80e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGATCGAGCCCAAGATCGACGACCTGCTCGCCCGGGTCGACTCCAAGTACACCCTGGTCATCCTGGCCGCCAGGCGGGCCAGGCAGATCAACGGCTACTACAGCCAGCTCGGCGAGGGCATCGGCGAGTTCGTCCCGCCGATGGTCGACGCCGGCCCCAACCGCAAGGCCCTCTCGGTCGCCCTCCAGCTGAACTGGGAGCGCCCGGCCGAGGTCGCCGAGTCCATCAAGTAG
PROTEIN sequence
Length: 78
MIEPKIDDLLARVDSKYTLVILAARRARQINGYYSQLGEGIGEFVPPMVDAGPNRKALSVALQLNWERPAEVAESIK*