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PLM3_30_b2_sep16_scaffold_2030_3

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(1638..2888)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 423.0
  • Bit_score: 276
  • Evalue 3.80e-71
Type II secretion system protein {ECO:0000313|EMBL:EEF57197.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 423.0
  • Bit_score: 276
  • Evalue 5.40e-71
gspF; general secretory pathway component, cryptic similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 411.0
  • Bit_score: 257
  • Evalue 5.20e-66

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1251
ATGCCACAGTTTGCATACCGTGCCCGCGACGCGCAGGGAAGCTTGGTTGAGGGCGTGCTCGATTGCCCGGATCGAGCAGTCGCCATTCGACAAATTGAATTGCAGAAATGTATTCCGGTCCGGATCGACCTAGTTGGGCCGGAGGCCAAAACGGCGCAACGAGACGGCGCCGCGCCCGCGCCCGCCGCTCCCACGCAAAATCTAAAAATTCCGCACGGTCAGTTGCTCGTTTTTACAGAGCAGCTCGCCCATTTGCTGCAAGCAGGAATGACGCTCGACGAGGGGCTATCAGTATTGGAAAAACGTTTGAAGCAGCCGCGCGTCCAGCAAATGACGCACATGCTGCATCAGGCGCTGGTCGATGGCCGCAGTTTTTCACAAGCATTAAGTGAGCTGCCGCGGATTTTCCCGCCGCTCTATGTAAACCTGGTGGCTGCCGGCGAGGCGAGCGGAGCGCTTCCCCAGATTCTGCTCCGTGTAGTCAAGAGTTTGATGCAAGCGAAGGAGCTGCGAGATCGCGTACAGCAGGCACTAATTTATCCGGCTTTTCTCGCGGTGGCTGGCGCCGTTCTTGTTACGATTTTTATCACGTTCATGGTCCCACAGTTAACCGGATTCATGGCACAAACTGGCGGCGCGCTTCCATTGCCCACGCGGATTCTGCTGCACATTAATCACTTGATTACGGGATACTGGTGGGTTGGCGTGCTGGCGGGGATTAGCGCAGTAGTCGGTTTCCGCGCACTGGTCCGCAGCGACGAAGGACGCATAGGTTGGGATCGTTTCCAGCTGATGATTCCCGGATACGGGCGTGTTATTCGACATCGTTACTACGCGCAGATTTCGCGTACGCTGGGAACCTTGATCGAAAATGGGATACCTCTGCTGCGTGCGCTCGATCTAGTAACTGAAATTGCAGGGAACCGGTTCCTCGAACAAAAACTGGTCGAGGTGCGCAAGGCGGTCATCGACGGCGCGACGCTCTCCGCCGCTCTGCAAGCGCAAAAACTGTTCCCTGATTTGTTCACGGACATGATGTCGGTGGGAGAACAAACAGGACATTTCGCCGAAACCATGCAGGCCATTGCCGATGTTTATGAACGCGAACTAGACAAGACCGTCGGCTTGATTTCGCAGTTGATTCCGCCGGTGATCATCGTCGTGATCGCCGCTCTGGTAGGTCTGGTTGTTTTCAGCATTCTGTCGGCCGTATTCGAGATGACACACAGCCTGCAAATCAGGCCGCATTGA
PROTEIN sequence
Length: 417
MPQFAYRARDAQGSLVEGVLDCPDRAVAIRQIELQKCIPVRIDLVGPEAKTAQRDGAAPAPAAPTQNLKIPHGQLLVFTEQLAHLLQAGMTLDEGLSVLEKRLKQPRVQQMTHMLHQALVDGRSFSQALSELPRIFPPLYVNLVAAGEASGALPQILLRVVKSLMQAKELRDRVQQALIYPAFLAVAGAVLVTIFITFMVPQLTGFMAQTGGALPLPTRILLHINHLITGYWWVGVLAGISAVVGFRALVRSDEGRIGWDRFQLMIPGYGRVIRHRYYAQISRTLGTLIENGIPLLRALDLVTEIAGNRFLEQKLVEVRKAVIDGATLSAALQAQKLFPDLFTDMMSVGEQTGHFAETMQAIADVYERELDKTVGLISQLIPPVIIVVIAALVGLVVFSILSAVFEMTHSLQIRPH*