ggKbase home page

PLM3_30_b2_sep16_scaffold_3774_2

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 654..2039

Top 3 Functional Annotations

Value Algorithm Source
Ysh1p: subunit of polyadenylation factor I, putative Tax=Verrucomicrobium spinosum RepID=UPI00017466CC similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 461.0
  • Bit_score: 438
  • Evalue 8.40e-120
beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 459.0
  • Bit_score: 416
  • Evalue 9.70e-114
Beta-lactamase domain protein {ECO:0000313|EMBL:CDB55625.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 459.0
  • Bit_score: 416
  • Evalue 4.80e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Akkermansia muciniphila CAG:154 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1386
TTGAAATTCATCAACCTGACGCGCCGCACCGAGATTGGCGCGAATTCATACTATCTCGAGATGGACGGCCATCGACTGGTGCTCGATTGCGGGATGCATCCCAAGGACACTGGTGAGGATGCGCTGCCGAATTTCAAAGCGATCGCTGTTCAGGAGATCGAAGCGATCCTGGTCTCTCACGCTCATCAGGATCACATCGGCACATTGCCGGTATTGATGCGACGCTTTCCATCGGCGCGCATTTTCATGACGGAAGCCACCGCCGAGATCGGCGACGTACTTTTGCACAACTCGGTTAATGTGATGACCAGGCAACGCGAGGAAATCGGTCGCGCTATCGCGGGGTCATATCCGCTTTTCACGCATCGAGAAACCGATCGCGCCTCGAAACGCTGGCGTTGGTGTCCATTGCGCCAGCGCATCTCGATTTCTGGCGAGCGCGCACCCCAGGGTGAGAAAGACACACTGACATTCGAGTTTTTCGACGCAGGACACGTGCTGGGCTCGAGTGGAATTCTGCTGCGAGCGGAAGGTAAAACAGTCTTTTACACCGGGGACGTCAATTTCGACGATCAAACAATTATGGGAGCGGCGACTTTTCCAGAAGAGAAGATTGATGTTCTGATCATGGAATGCACGCGAGGCGACCATCCAAAACCCGCTGGCTGGACGCGCGCCAGTGAAGAGCGACGTCTGGCAGAAGCGATTGGCGCTGCTTTTGAGCGCGGCTCGTGCGTGCTCATACCCGTCTTCGCGCTGGGAAAAACGCAGGAAGTCCTGGCAATGCTTTACAAGTTCCGTCGCGAAAGGCTCCTGCCGGAGTTTCCAATTTACATTGGCGGTCTCAGCTCAAAGATGACTGATGTCTACGATCGGCGCGCGCATATGACTCGCCGGCAATTGCCGCGCCTGCAATTAATGCGGGAAGCCGCACCATTCATATTGAACGAAGAAACAGTCCGTGACGCGCCACTGCGCCCGGGACGGATTTACGTGCTCTCCAGCGGGATGATGATACCAAAAACACTCTCCAATGCTCTAGCGCAGCGGCTGATCGAAAACCCGCAGCATTCGATCTTTTTTGTCGGCTATGCTAGCCCGGAATCACCCGCCGGTCTTCTACGGGACGCGAGAACAAATGGGGAGGTTACCCTTGACCCCGACAAGCCGGCCCAGCGCGTCCGCTGCACGATCGAACAGTTTCAGTTCAGCGCACATGCCACGCGCGAAGCGCTCATCGATTACGCCAAAAGGCTGGCGCCTGGCAAAATTGTTCTTGTGCACGGCGATCCACCGGCCGTGGCGTGGATGCGCGCGACATTGTCCGCAGCTCTTCCGCGGTCAGAGATCATTGTCCCAGCGCCAGGAATAGAATTAGAATTGTGA
PROTEIN sequence
Length: 462
LKFINLTRRTEIGANSYYLEMDGHRLVLDCGMHPKDTGEDALPNFKAIAVQEIEAILVSHAHQDHIGTLPVLMRRFPSARIFMTEATAEIGDVLLHNSVNVMTRQREEIGRAIAGSYPLFTHRETDRASKRWRWCPLRQRISISGERAPQGEKDTLTFEFFDAGHVLGSSGILLRAEGKTVFYTGDVNFDDQTIMGAATFPEEKIDVLIMECTRGDHPKPAGWTRASEERRLAEAIGAAFERGSCVLIPVFALGKTQEVLAMLYKFRRERLLPEFPIYIGGLSSKMTDVYDRRAHMTRRQLPRLQLMREAAPFILNEETVRDAPLRPGRIYVLSSGMMIPKTLSNALAQRLIENPQHSIFFVGYASPESPAGLLRDARTNGEVTLDPDKPAQRVRCTIEQFQFSAHATREALIDYAKRLAPGKIVLVHGDPPAVAWMRATLSAALPRSEIIVPAPGIELEL*