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PLM3_30_b2_sep16_scaffold_6898_1

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 1..588

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XQD3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 194.0
  • Bit_score: 276
  • Evalue 1.80e-71
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF57957.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 194.0
  • Bit_score: 276
  • Evalue 2.50e-71
sigma factor, ECF subfamily protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 194.0
  • Bit_score: 211
  • Evalue 1.20e-52

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 588
GCACATCCGGCCGGCAACCAGCCGAAGACACATGCTCTTTTGGCCTTGATGCTATTGAATGCCGCTCGCAATCCGACGCGTCTGGATGGCGCGGGCAATTTGCTCCGCCTGCAAGAGCAGGATCGGACACGTTGGAACAAATCAATGATCGCGCGCGGCATGTTTCACTTCGCGCGGTCGGCAGCAGGTGACGAGCTCAGCGAATACCATCTTCAGGCAGGGATCGCCGCCTGTCATTGTGCAGCGAAGGATTACAAATCTACCGACTGGCAGAAAATCCTTTTGCTTTACGACCGGTTGGCTGAATTCGATCAGTCGCCGGTTGTGGGTCTCAATCGTGCGGTAGCCATCGCAAACATCCAAGGACCAAAAGCGGGCCTCGAGGCTGTACGGCGGGTTCGAGATCTCAGTAAACTGAGTTCCTATTACCTGCTCTATGCCGTGCTCGGTGAATTCGAAATGAAGTCTGGTAATCTGCAAGCCGCTGCCGAGCAGTTCCGACGATCGTTTGAGCTCGCGAAAACGAAATCGGAGCGAGCGTTTCTTTTGAAGAGACTGCAGCGCTGTGCAGACAGCCAGACTGCTTAA
PROTEIN sequence
Length: 196
AHPAGNQPKTHALLALMLLNAARNPTRLDGAGNLLRLQEQDRTRWNKSMIARGMFHFARSAAGDELSEYHLQAGIAACHCAAKDYKSTDWQKILLLYDRLAEFDQSPVVGLNRAVAIANIQGPKAGLEAVRRVRDLSKLSSYYLLYAVLGEFEMKSGNLQAAAEQFRRSFELAKTKSERAFLLKRLQRCADSQTA*