ggKbase home page

PLM3_30_b2_sep16_scaffold_12435_5

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(2850..4790)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine synthase Tax=Desulfovibrio sp. U5L RepID=I2Q1Q2_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 657.0
  • Bit_score: 385
  • Evalue 6.90e-104
Spermidine synthase {ECO:0000313|EMBL:EIG53708.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 657.0
  • Bit_score: 385
  • Evalue 9.70e-104
spermine/spermidine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 644.0
  • Bit_score: 369
  • Evalue 1.90e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio sp. U5L → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
GCGCTGGTTCCAACGTCTGTCGCGGTATTTGACCTCAGTTGGTGGCGAATCACACTGCTCTCCACAGGTTTAATGTTCCCGGTCGCCTTGGTCTCGGGAATTTTGTTTCCGGCCATCGCCGCAAGTGTACAAGCCGCAGTGGGCGACCGGATGAACAGCACTGGGATCACCACACTGCTTAATACGGTAGGCGCAGCGTTCGGTGCGCTCCTGGCAAGTTTCGTCCTTCTGCCGGGCATCGGCTATCAATGGAGCCTCATCGGCTGCGCTGCCGGCTACGCGCTGCTGAGCCTTGTGGCACCTCTTGCAGTGTGGCGACCTGTCGGCGCCTCGAAAGCGCCGACAATGCCGCGCAGTCCAAAGCATGGTGTCGCCGCCACTGTTCTAATCGCTCTCTGGATCGTTCTGATTTTCATTTTTGCAATTTTTCCGTATCGGCGCGCTGAGACGCACTTTGCACACGCGAGTCGCCCTTACGAAACGCCAGAGGGGGAAAAGCGGTTGGCGCATGCTGTGAAACGGATCGAGGGCACCTCGGATACGTGGCAATTACTTCGGCGCGATCTTGCTGGCGAACCGTACTACTACCGGCTCCTGTGCAATGCGTTTTCAATGTCGGCCACGAATCCAACCGGCCAGCGTTACATGAGATTGTTTGCTTATCTTCCTCTGGCTTTTCGTCCCGAATCACAAAACGTTCTGCTGCTCTGCTACGGATGTGGCGTCACCGCAGATGCGCTTCTTCACGGGCCAAACATCAAGCGAATGGATGTGGTGGACATTTCCAAAGAAGTATTTCGCCTCGCAGATTTCTATAGCGGACCCGATTACAACAATCCGTTGCACGACCCACGGGTAACGACATTCATTCAGGACGGACGTTTCTTTCTTGAAGCCGCTCCGCGAGAATACGACATCATTTCCGGCGAACCGCCTCCGCCGAAAAACGCGGCTTCGGTCAACCTCTATACCAAGGAATTTTTTTCTCTTATGAAGAGCCGCCTCAGGAAAGGCGGAATTGCGAGCTTTTGGCTGCCAATTGACCAACTAAAGTTGAATGAGGCAAAAGCAATTCTTCGCGCGTTTCACGATGTGTTTTCGAACGCATCGGTGTGGGCAGCCGATGAGAACTGGATCATGATGGGCATCAAGGGCCCCGGCCGCAGGGTGAATGAAGAGGAGTTGCGCCATTTGTGGAACGACCCCGCGAGCGGCGCGGATTTAAAACGTATTGGGGTCGAGGTCCCGCAGCAATTGGGCGCATTGTTTTTGATGGACGGCGATGAGATCGATCGCATGACGAGCGACATCGCGCCGCTGACGGACAATTATCCGAAGCGATTGAGTGATGCGCCATGGGACACAAGGGCGAATCTTGAGTTCGTCGCGGCTTACATGGAGCCAGCATCGGTCTCCGAACGCTTTCTAGGGTCGCCGCTGATCAAACGTATCTGGCCGGAGGCGCTAAGTAAATCAATGGAGTCCCTTTTCGCCGTTCGTGAGACGCGGTTCCTTTCGGAAACCGTTGGAAGCAACAAACTGGCCGAGCTCGATCTTTTTCTACGAGGGACACGCCTGCGCGTGCCGGTCTTGGAAGCATTAGGCAGCGACGAACTACGACTCGCCATCGCGCAGCGGGTTGCGCACGAGACAGAACCACCGCCATTGGAGATTGCGCCAGACCTCATTGCCGGCGCGCTGGCGCGGCGCGATTTGGATCAAGCGATCCGGCTTCTAGAAAATCAGAAAGATCGCGGCGCTTTCGGTGTTCGTGAAACCTTGCTGCTAACGTACCTCTACTGCTTGAATGCCAATGTGGATAAGGCCGAAGCGCTCGCAGCAGCGAATTCCGCATTGGTCAATAACGATTCGTTGGCCGATTGGCTGTGGAAAAAATTAGAGTCCGACTTCGGGTTTCATCCTCCAAGCAAGCGCGAATGA
PROTEIN sequence
Length: 647
ALVPTSVAVFDLSWWRITLLSTGLMFPVALVSGILFPAIAASVQAAVGDRMNSTGITTLLNTVGAAFGALLASFVLLPGIGYQWSLIGCAAGYALLSLVAPLAVWRPVGASKAPTMPRSPKHGVAATVLIALWIVLIFIFAIFPYRRAETHFAHASRPYETPEGEKRLAHAVKRIEGTSDTWQLLRRDLAGEPYYYRLLCNAFSMSATNPTGQRYMRLFAYLPLAFRPESQNVLLLCYGCGVTADALLHGPNIKRMDVVDISKEVFRLADFYSGPDYNNPLHDPRVTTFIQDGRFFLEAAPREYDIISGEPPPPKNAASVNLYTKEFFSLMKSRLRKGGIASFWLPIDQLKLNEAKAILRAFHDVFSNASVWAADENWIMMGIKGPGRRVNEEELRHLWNDPASGADLKRIGVEVPQQLGALFLMDGDEIDRMTSDIAPLTDNYPKRLSDAPWDTRANLEFVAAYMEPASVSERFLGSPLIKRIWPEALSKSMESLFAVRETRFLSETVGSNKLAELDLFLRGTRLRVPVLEALGSDELRLAIAQRVAHETEPPPLEIAPDLIAGALARRDLDQAIRLLENQKDRGAFGVRETLLLTYLYCLNANVDKAEALAAANSALVNNDSLADWLWKKLESDFGFHPPSKRE*