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PLM3_30_b2_sep16_scaffold_73_21

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 23954..24433

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein Tax=Frankia sp. (strain EuI1c) RepID=E3J0V4_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 165.0
  • Bit_score: 72
  • Evalue 3.20e-10
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 165.0
  • Bit_score: 72
  • Evalue 9.10e-11
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 147.0
  • Bit_score: 182
  • Evalue 3.10e-43

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAGCCCTCTCGCAATCGAAGCAGGGAAGGCTCTGCGACAAGCACGCCGAGCCCGGGGTTTGACGCTCCGACAGGTGTCATCCGCGACTGAAGGCCGGCTCAGACCTTCCTCGGTTGCCGGATACGAGCGAGGTGAGCGGACCATCTCGCTGGAGCGCTTCTGCGATCTCTGCCAACTGTATGGTATTGCGCCCCAAGCACTCCTCGCCGATGTTATCCGAGCTCTCGAAGGCAAACGCGAGCCCGTCGTCGATCTGACACTCCTCGCTTCCTTGGGGTCGGCCGAAGGCGCGCTCGTCTCAGGATTCATCCGACAGATCCGAGCGCTTCGTCGGGAGCAGCCATCAGAGAAGATCGTGCTCAGGATGGGTGACCTCGAGGTCCTCGCGAACGCAGCGGGCAAGAAACCGGAGGAGCTCATCGAGCTGCTGGGCCCCAGTATCTTGGGGGAGCCTGAGGAACTCCAGACGAACGCTTGA
PROTEIN sequence
Length: 160
MSPLAIEAGKALRQARRARGLTLRQVSSATEGRLRPSSVAGYERGERTISLERFCDLCQLYGIAPQALLADVIRALEGKREPVVDLTLLASLGSAEGALVSGFIRQIRALRREQPSEKIVLRMGDLEVLANAAGKKPEELIELLGPSILGEPEELQTNA*