ggKbase home page

PLM3_30_b2_sep16_scaffold_2241_1

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 2..424

Top 3 Functional Annotations

Value Algorithm Source
bacterial nucleoid DNA-binding protein bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 86
  • Evalue 1.90e-14
DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 96.0
  • Bit_score: 82
  • Evalue 5.90e-14
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 100.0
  • Bit_score: 174
  • Evalue 5.70e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GGGAAACCAGTAGCGTCGGAACCCTTCTCATGGGCAAGATGGTTGCACGCCAACGCGGCATTGACCAGCGGCCCGTCGCGTGCGTACGGTGCCGGAGCGGATCCTGGGGGTGGCGACGTGAACAAGAACGGACTGATCGCCGAGGTGGCCAAGCGCACGGGCGCGAGCAAGGCGGACGTCGGTCGCATGATCGATTCGTCCATGGATGTGATCCGGGAGTCGGTGTCGCGCGGCGAGCGGGTCTCCCTGGTCGGGTTCGGGACCTTCGAACGCAAGCGCCGGAACAAGAGGATCGCGCGGAACCCACGCAAGCCGATGACGCCCATCGTGGTGCCCGCGCGCGACCTGCCGTGGTTCACCGCAGGCAAGGAGTTCCGCGAGATGGTCGCGTCCAAGCGCCGACGCGTCCCCGCCAAGCGCTAG
PROTEIN sequence
Length: 141
GKPVASEPFSWARWLHANAALTSGPSRAYGAGADPGGGDVNKNGLIAEVAKRTGASKADVGRMIDSSMDVIRESVSRGERVSLVGFGTFERKRRNKRIARNPRKPMTPIVVPARDLPWFTAGKEFREMVASKRRRVPAKR*