ggKbase home page
This organism can only be binned in the context of its binning project GWC1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

PLM3_30_b2_sep16_scaffold_2241_7

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(4435..4668)

Top 3 Functional Annotations

Value Algorithm Source
AsnC family transcriptional regulator Tax=Nonomuraea coxensis RepID=UPI0003828ECD similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 77.0
  • Bit_score: 128
  • Evalue 1.80e-27
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 77.0
  • Bit_score: 128
  • Evalue 6.70e-28
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACZ90661.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 77.0
  • Bit_score: 128
  • Evalue 3.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 234
GTGGTCCAGGCCTACATCCTGATCCAGACCGAGGTCGGCAAGGCCGCCCAGGTCGCCAAGGAGGTCCGCGACATCGCCGGCGTCGCCGAGGCCGAGGACGTGACGGGGCCCTACGACGTGATCGTGCGCGCCGAGGCGAAGAACGTCGACGAGCTGGGCAAGCTGGTCGTCGCGAAGATCCAAGGCGTCGAGGGGATCACCCGGACGCTCACCTGCCCCGTCGTCCACCTGTAG
PROTEIN sequence
Length: 78
VVQAYILIQTEVGKAAQVAKEVRDIAGVAEAEDVTGPYDVIVRAEAKNVDELGKLVVAKIQGVEGITRTLTCPVVHL*