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PLM3_30_b2_sep16_scaffold_2458_7

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(4644..6245)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y715_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 573.0
  • Bit_score: 542
  • Evalue 3.70e-151
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 573.0
  • Bit_score: 542
  • Evalue 1.00e-151
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 302.0
  • Bit_score: 553
  • Evalue 2.90e-154

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
GTGGCCACCACCGATAAGCGTGCCCTCGAGGGAAAGGTCGCCGCGGAGCTGCATCAGATCGCGGCGGACCTCGGTATCGAGGGGCACAAGGGATTGAAGAAGGCCGACCTGGTCGACAAGATCGTCGCGCACACCAACGGCGAGCGTGCCGATGCGTCGTCCGTCGTCGCCGCGGCGCCCGACGCCGCGATGGCGTCGATCGACACGACGACGAGCCCGACGAGCGGCCAGGCGTACGTCGAAGTGGAGGAGACCTCAGGCAACGGCGACACGCGCCAGCGCCCGCAGCCGGATCAGCGCGACCAACGTCAACGCGACGACCGGCGGGAAGGGGCCCGGCCACAGGGTGGCCGTCCCGATGCAGGACAACAGCAGCGCGAGCGCGAGGGCGGTCCTCGCCGACGTCCATCACGAGAGGAGCGCCGTCGCCAGCGCGAGGAGCGCCGCCAGCGCGAGATCGAGATGCGGGAGGAGGAGCTCCAGACCGCCCCGACCGCGACCGGGCTGCTCGACGTCCTGCCCGAGGGCTACGGGTTCCTGCGGACCTCCGGTTACCTGCCGGGACAGCAGGACATCTACGTGTCCCTCTCGCAGGTCCGTCGGTTCATGCTGCGCAAGGGCGACACGGTCACCGGCAAGGTGCGGCAGCCCAAGGACAGCGAGAAGTACTTCGCGCTGCTGCAGATCGACTCGGTGAACGGGATGGACCCGGAGGAGGCGAAGCAGCGGCCGAACTTCGACAAGCTGACGCCGCTGTTCCCCAACGAGCGGTTCCACCTGGAGACCGGCCCGACGGACGTGACCGGACGGATCATGGACATGGTGTCGCCGATCGGGAAGGGGCAGCGCGGCATGGTCGTCTCACCGCCCAAGGCGGGCAAGACCACCGTGCTGAAGAACATCGCGAGCGGCATCATCCAATCGAGCCCCGACACGCACGTGATGGTGCTCCTCGTCGACGAGCGGCCCGAGGAGGTCACGGACTGGCAGCGCACGGTGCAGGCGGCCGAGGTCGTCTACTCGACGTTCGACAAGCCGCCGGACCAGCACATCCAGGTGACGGAGCTCGTCCTGGAGCGGGCCAAGCGCCTTGCCGAGATGGGGCAGGACGTCGCGATCATCCTCGACTCGATCACCCGGCTCGCGCGCGCGTACAACCTGGCCGCGCCGGCCTCGGGCAAGATCCTGTCGGGCGGGATCGACTCGACCGCCCTGTACCCGCCCCGGCGGTTCTTCGGAGCCGCCCGGAACATCGAGGAGGGTGGGAGCGTTACCATCATCGCGAGCGCCCTCGTCGAGACCGGGTCCAGGATGGACGAGGGGATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGCTCCGACTTGATCGGCAGCTCGCAGAGAAGCGCCTGTTCCCCGCGATCAACGTCGAGGCGAGCAGCACCCGCAAGGAGGAGCTGCTGATGCCGACCGAGGAGCTCGCGCTCGTGTGGCGCCTCCGGAGGGTGCTCCACGCGCTCGAGCCGGGGGCCGCGCTCGAGTTGCTCACCGACAAGATCCGGGCCACCAAGTCCAACGAGCAGTTCCTGCGGGAGATCGCGAAGGCCCCGGCCTCGTAA
PROTEIN sequence
Length: 534
VATTDKRALEGKVAAELHQIAADLGIEGHKGLKKADLVDKIVAHTNGERADASSVVAAAPDAAMASIDTTTSPTSGQAYVEVEETSGNGDTRQRPQPDQRDQRQRDDRREGARPQGGRPDAGQQQREREGGPRRRPSREERRRQREERRQREIEMREEELQTAPTATGLLDVLPEGYGFLRTSGYLPGQQDIYVSLSQVRRFMLRKGDTVTGKVRQPKDSEKYFALLQIDSVNGMDPEEAKQRPNFDKLTPLFPNERFHLETGPTDVTGRIMDMVSPIGKGQRGMVVSPPKAGKTTVLKNIASGIIQSSPDTHVMVLLVDERPEEVTDWQRTVQAAEVVYSTFDKPPDQHIQVTELVLERAKRLAEMGQDVAIILDSITRLARAYNLAAPASGKILSGGIDSTALYPPRRFFGAARNIEEGGSVTIIASALVETGSRMDEGIFEEFKGTGNMELRLDRQLAEKRLFPAINVEASSTRKEELLMPTEELALVWRLRRVLHALEPGAALELLTDKIRATKSNEQFLREIAKAPAS*