ggKbase home page

PLM3_30_b2_sep16_scaffold_5958_2

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(1075..1674)

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase Tax=Nitrolancetus hollandicus Lb RepID=I4EGS7_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 191.0
  • Bit_score: 123
  • Evalue 2.00e-25
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 188.0
  • Bit_score: 114
  • Evalue 3.40e-23
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 193.0
  • Bit_score: 244
  • Evalue 1.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGCGCGCGACCGCGCCTCGCGTCCGGAGGCGAAGCCGCTCCGCCTATTCGCCGCGGTGGAGATCCCGGAGGACATCCGCGGCAACCTGGCCGAGGCGGTGCGCCCCGTCCGCGAGCGGTTCCCGAAGGCGCGATGGGTGCCGATCCAGAACCAGCACGTGACGGTGAAGTTCCTCGGTTCCACCTACCCGCGGCTGGTCGAGTGGGTGACCGGATCGATCTCGGCCGTTGCCGGCCGCCACGCGCCGTTCCCGACGCGGGTGGAGGGGCTCGGCGCGTTCCCGAGCGGCCGTAAGGCCCGCGTCCTGTGGGCCGGGCTCGACGACGGCGACGGGCGGCTCGAACGCCTGGCGGCGGCCCTCGACGAGGCCCTCGCGCGCGAGTTCGCGCCGGAGAAACGCGCCTTCACGCCGCACCTGACGGTCGCTCGTTTCGACCCGCCCGCGCCCCTCGATCCGCTGGAGGTCGCGTTCGAGAGCGAGCCGTTCGAGATCGACCGGATCGTGCTGTTCCGCAGCCACCTGCGCCGGCCCGCTCCCGTGTACGAGCCGCTCGGGATCTACCCGCTCGGGTTGGCACGTGATCCGCGACCTGCTTGA
PROTEIN sequence
Length: 200
MARDRASRPEAKPLRLFAAVEIPEDIRGNLAEAVRPVRERFPKARWVPIQNQHVTVKFLGSTYPRLVEWVTGSISAVAGRHAPFPTRVEGLGAFPSGRKARVLWAGLDDGDGRLERLAAALDEALAREFAPEKRAFTPHLTVARFDPPAPLDPLEVAFESEPFEIDRIVLFRSHLRRPAPVYEPLGIYPLGLARDPRPA*