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PLM3_30_b2_sep16_scaffold_12788_1

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2..568)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein CcmA involved in cell shape determination Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KD70_HALHC similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 124.0
  • Bit_score: 92
  • Evalue 4.60e-16
Integral membrane protein CcmA involved in cell shape determination similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 124.0
  • Bit_score: 92
  • Evalue 1.30e-16
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 131.0
  • Bit_score: 128
  • Evalue 6.30e-27

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGTCGAGGCGAGGACGCCGCCAGGGTGGCCGAGGTCCGGACGAGCCCAGTGAACCTGGGATCAAGGAGACCCTCGGCCCGGAGATGACCGTCGTGGGTCGTGGGGCTCAGTTGGAGGGAACGCTGGTATCGACCGAATCGATCCGTATCGACGGCCAGGCCAAGGGGAAGATCGCTGCACGAGTCGACGTGATCCTCTCGTCCGACAGCCACGTCGAGGCCGACATCCAGGCCGAGAACGTGGTGGCGGGGGGGACGCTCAAGGGAAGTATCACTGCACGGACCATGACCGAGGTGGCCGAGGGCGGCCGGGTGGAGGGCACGATCCGATCCAAGGCCCTGGTCGTGAGCGAAGGGGCCCTGTTCTCCGGCCAGGCGAGCATCGACCTCCAGGACGCCCCAGGTGAGGCAGCCAAGCTTGCGTATCAAGAGGACGAGCTGCGGATGGGCTATGAGCAATCGGTCCGCCGGACCGCCGAGTGGTACAGGTCGACCCTCTTTGAACCGAAGGCGGATGCGGATCACGAAATCGCGAAGGAATCGGACGCCGCAGGCATCTCTGTGCCG
PROTEIN sequence
Length: 189
MSRRGRRQGGRGPDEPSEPGIKETLGPEMTVVGRGAQLEGTLVSTESIRIDGQAKGKIAARVDVILSSDSHVEADIQAENVVAGGTLKGSITARTMTEVAEGGRVEGTIRSKALVVSEGALFSGQASIDLQDAPGEAAKLAYQEDELRMGYEQSVRRTAEWYRSTLFEPKADADHEIAKESDAAGISVP