ggKbase home page

PLM3-1_50_b2_sep16_scaffold_1639_2

Organism: PLM6_50_b2_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(564..1481)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B TruB (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 293.0
  • Bit_score: 220
  • Evalue 5.20e-55
tRNA pseudouridine synthase B bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 296.0
  • Bit_score: 353
  • Evalue 1.80e-94
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 296.0
  • Bit_score: 371
  • Evalue 6.90e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
GTGACGAAGAGTGATCTCGTGGTGGATAACGGTCTCCTTTTGATCGACAAGCCAGCAGGCCCCTCCTCCGCCCAGGTGGTGCACCGGGTCAAAGTTCTGCTGAGAGCCAAAAAAGTCGGACATCTAGGCACCTTGGACCCATTTGCTTCAGGACTGTTGCTTTTGGGAATCAACGAAGGAACCAAGGTTGCTGACCTATTCCTGAGCGCTCCTAAGAGTTATCACGGTATCATGGTCTTAGGAGTGGAGACCGATTCCCAAGACGCCACCGGCACTATTGTCCAAATACGAGCGGTGCCGGCCATAGGAAAAGTCGAGCTCAGAGATCTGGAACAGCAATTCTCCGGTGATCTGCAGCAGGTGCCGCCGATGTTTTCAGCGTTAAAAAGGGAAGGTGTGCCTCTCTACAGGCTGGCGCGCCAAGGGAAAGAAGTGCCGCGGGAACCCCGGTCCATCAGAGTTGAAAAGCTGCGACTGCACAAGTTGGGCAACGAGGAGATTGAAATCGAGTTGACCTGTTCTCGTGGAACTTATGTTCGGACTCTGGCGGCTGACATGGGGAAATTTCTGGGTTGCGGTGCACATCTGAAAAGCCTTCGCCGCATCGCATGCGGTCATCTGACGATAGATCAGGCGGTGACTTTGGACGAGCTTGAGCGGCTCGATCCAAGCAGGGCGGCTCCTCTCTTGTCTTTGGAAAAAGCTCTGGACCATCTTCGGGCCATTACCTGGGAAAACCAATTGCTGTCTCGACTCCGACTTGGGCAGCAAGAAACCTTGAGGCACCTAGATAAGCCGATAGGGGGCGAGAAGCTGGCTCGTATCCTCGATCCTCGCGGAGGGCTGGTTGCTTTGGTGGAGTGGATTGAAGATGTCCCGCAGGGCCGCTGGCGGCTTATCCGAATATTCAAGGCATAG
PROTEIN sequence
Length: 306
VTKSDLVVDNGLLLIDKPAGPSSAQVVHRVKVLLRAKKVGHLGTLDPFASGLLLLGINEGTKVADLFLSAPKSYHGIMVLGVETDSQDATGTIVQIRAVPAIGKVELRDLEQQFSGDLQQVPPMFSALKREGVPLYRLARQGKEVPREPRSIRVEKLRLHKLGNEEIEIELTCSRGTYVRTLAADMGKFLGCGAHLKSLRRIACGHLTIDQAVTLDELERLDPSRAAPLLSLEKALDHLRAITWENQLLSRLRLGQQETLRHLDKPIGGEKLARILDPRGGLVALVEWIEDVPQGRWRLIRIFKA*