ggKbase home page

PLM3-1_50_b2_sep16_scaffold_28555_1

Organism: PLM6_50_b2_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(29..1024)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transporter ATP-binding protein bin=GWB1_Deltaproteobacteria_rel_55_8 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 326.0
  • Bit_score: 443
  • Evalue 1.10e-121
oligopeptide ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 319.0
  • Bit_score: 423
  • Evalue 4.40e-116
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 320.0
  • Bit_score: 555
  • Evalue 4.80e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCCGATCTCATTCAAGTCAAGAACCTTCAAACCTCTTTCTTTACGCCGGAAGGGGAAGTACGGGCGATCGACGGGGTTAGTTTCGACATTTCGGAGGGGAAAACGCTCGGCCTGGTGGGCGAGTCCGGTTGTGGCAAGAGCGTGACGTCGCTCTCCATAATGCGTTTGATCCAGTCACCGCCGGGGAAGATCGTCGGCGGGGAGATTTCGTATCGCGGCCGTGATCTGCTCAAGCTGAGCAACGAGGAAATGCGCAAAATCCGCGGCAACGAGATTTCTATGATTTTTCAGGAGCCTATGACCTCGCTCAATCCGGTTTTTACCGTCGGTAATCAGATCGGGGAGGCGATCCGCCTGCACCAGGGATTGGGCAAGAAACAAACCCGCGAGAAGACCATTGAAATGCTTCGCTTGGTGAAGATTGCCGATCCGGAGTCTCGCGTGGATTCTTATCCTCATCAGTTGAGCGGCGGGATGCGCCAACGGGTGATGATCGCCATGGCGTTGTCCTGCAATCCGAGCCTCCTGATCGCCGACGAGCCGACGACGGCGTTGGATGTAACCATTCAGGCGCAGATCCTAGAGCTGATGAAAGAGCTGCAGCAAAAGATCGGTATGGCCCTTTTGCTGATTACCCACGATCTCGGAGTCGTGGCGGAGCAGGCCGATGAGGTCGCGATCATGTATGCGGGTAAGATCGTCGAACGCACGAGCGCGCCAGCGATCTTCGCGCGACCCTTTCATCCCTACACGGTGGGTCTGCTCAATTCTCTGCCCGGCACGGGAGACAAAAAGAAAAAGCGCCTGGATGCGATCCCGGGTGTCGTGCCGAGTCCACTGCATCTCCCGAGCGGCTGTCGATTCCGCGACCGTTGCCCCAGGGCTGCCGGGTTGTGCGCTGATGCGGAGCCTCAGCTGGTAGAAAAGGAACAAAATCATTTTGTCGCCTGCTATTTCCCTGAAACCGGGCAGCGGGCCGGCGCGCAAAATTGA
PROTEIN sequence
Length: 332
MADLIQVKNLQTSFFTPEGEVRAIDGVSFDISEGKTLGLVGESGCGKSVTSLSIMRLIQSPPGKIVGGEISYRGRDLLKLSNEEMRKIRGNEISMIFQEPMTSLNPVFTVGNQIGEAIRLHQGLGKKQTREKTIEMLRLVKIADPESRVDSYPHQLSGGMRQRVMIAMALSCNPSLLIADEPTTALDVTIQAQILELMKELQQKIGMALLLITHDLGVVAEQADEVAIMYAGKIVERTSAPAIFARPFHPYTVGLLNSLPGTGDKKKKRLDAIPGVVPSPLHLPSGCRFRDRCPRAAGLCADAEPQLVEKEQNHFVACYFPETGQRAGAQN*