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PLM3-1_50_b1_sep16_scaffold_10255_5

Organism: PLM6_50_b1_sep16_Aeromicrobium_marinum_64_7

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 9 / 38
Location: 2008..3021

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor Tax=Micromonospora sp. ATCC 39149 RepID=C4RF81_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 309.0
  • Bit_score: 321
  • Evalue 6.40e-85
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EEP72235.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 309.0
  • Bit_score: 321
  • Evalue 9.00e-85
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 267.0
  • Bit_score: 319
  • Evalue 6.90e-85

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Taxonomy

Micromonospora sp. ATCC 39149 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGGCCGCCCCCACATCAGCGCTTGAGCACCTGCTGCGCACCGAGGCGCCCCAGGTGCTCGGCGCGTTGGTGCGCCGATTCGGCCACTTCGACATCGCTGAGGACGCGGTCCAGGACGCACTGCTCGCCGCCGCACGACAGTGGCCGACCCAGGGCATCCCCGGCCATCCTCGCGGCTGGCTGATCCGGGTCGGCTACCGCCGCATGGTCGACCAGCTCCGCGCCGACCAGCTTCGGCAGCGCCGCGAGTACGAAGGGGCCAGCCAGCCGGCTTCCCCCGAGGGACCGGCCGCCGACGATAGCCTGACGCTGCTGTTTTTGTGCTGCCATCCAATCCTCACCCCGGTCTCCCAGGTCGCGCTGACGCTGCGAGCTGTCGGTGGCCTGACCACCGCTGAGATCGCTCACGCCTATGGAGTCACTGAAGCCGCCATGGGTCAGCGGATCAGCCGCGCTAAGCAACAGATCAGATCCGCTGGCGGACGGTTTGTCCTCCCATCGGCCGACGACCGAGGCAACCGACTGACCGCTGTGCTGCAGGTGCTGTACCTGATCTTCAACGAAGGCTACGCAGCGACCGCCGGTGAGCACCTGCAAAGGGTCGACCTGACCACGGAGGCGATCCGGCTGGCTCGATTGCTCTACCGGCTGATGCCCGACGAGCCCGAGGTGACCGGGGTGTTGGCGCTCATGCTGCTCAGCGACGCGCGCCGTCCCGCCCGCTCCACGGCGACTGCGCCAGGTCGGGCCGTACCAGCTGCAGGCCGCTATCGCCGCCTTGCACAATGGGGCACCCAGTTACGCCGAAACCGACTGGCCGCAAATCGCCACCCTGTACGCCTGGTTGGAGCGGCTGACACCCACCCCTCCTGTCCGGCTCAGCAGGGCGGTCGCGGTAGCGATGGCGTACGGCCCTCAACGCGGCATCAGGCTGCTGGACGGTTTCGCCGACGACCCGCTCATCCGACAGCGGGAGCGAGCCGTTCGCGCCCACCTGCTCGAACTCAACGGTGA
PROTEIN sequence
Length: 338
MAAPTSALEHLLRTEAPQVLGALVRRFGHFDIAEDAVQDALLAAARQWPTQGIPGHPRGWLIRVGYRRMVDQLRADQLRQRREYEGASQPASPEGPAADDSLTLLFLCCHPILTPVSQVALTLRAVGGLTTAEIAHAYGVTEAAMGQRISRAKQQIRSAGGRFVLPSADDRGNRLTAVLQVLYLIFNEGYAATAGEHLQRVDLTTEAIRLARLLYRLMPDEPEVTGVLALMLLSDARRPARSTATAPGRAVPAAGRYRRLAQWGTQLRRNRLAANRHPVRLVGAADTHPSCPAQQGGRGSDGVRPSTRHQAAGRFRRRPAHPTAGASRSRPPARTQR*