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PLM6_50_b1_sep16_Aeromicrobium_marinum_64_7

PLM3-1_50cm_b1_sep2016_Propionibacteriales_64_7
In projects: PLM3-1_50cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 1-50 of 336 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_50_b1_sep16_scaffold_16327
Species: Microlunatus phosphovorus (60%)
5 3006 bp 63.27 7.83 83.83
PLM3-1_50_b1_sep16_scaffold_16289
Species: Microlunatus phosphovorus (80%)
5 3010 bp 64.85 8.77 96.08
PLM3-1_50_b1_sep16_scaffold_22546
Phylum: Actinobacteria (50%)
4 3012 bp 69.22 6.37 91.63
PLM3-1_50_b1_sep16_scaffold_16182
Species: Microlunatus phosphovorus (100%)
3 3023 bp 64.51 6.00 81.77
PLM3-1_50_b1_sep16_scaffold_36442
Species: RBG_16_Actinobacteria_68_12_curated (50%)
4 3052 bp 68.55 8.21 85.52
PLM3-1_50_b1_sep16_scaffold_27319
Species: Microlunatus phosphovorus (100%)
4 3054 bp 63.52 6.43 92.34
PLM3-1_50_b1_sep16_scaffold_57635
Species: RBG_16_Actinobacteria_68_12_curated (60%)
5 3065 bp 67.60 5.38 91.62
PLM3-1_50_b1_sep16_scaffold_15634
Class: Actinobacteria (100%)
5 3088 bp 62.47 7.09 86.37
PLM3-1_50_b1_sep16_scaffold_38338
Order: Propionibacteriales (60%)
5 3096 bp 63.18 6.15 99.61
PLM3-1_50_b1_sep16_scaffold_15464
Species: Leifsonia aquatica (66.67%)
3 3107 bp 64.21 7.43 31.67
PLM3-1_50_b1_sep16_scaffold_37841
Species: Cystobacter fuscus (50%)
2 3116 bp 64.18 4.81 67.68
PLM3-1_50_b1_sep16_scaffold_30576
Species: Microlunatus phosphovorus (50%)
4 3122 bp 64.06 6.25 83.50
PLM3-1_50_b1_sep16_scaffold_23242
Species: Tetrasphaera japonica (50%)
4 3123 bp 63.50 6.20 83.29
PLM3-1_50_b1_sep16_scaffold_25625
Species: Microlunatus phosphovorus (100%)
3 3149 bp 64.40 8.29 98.79
PLM3-1_50_b1_sep16_scaffold_15019
Species: Microlunatus phosphovorus (66.67%)
3 3162 bp 62.11 6.55 88.24
PLM3-1_50_b1_sep16_scaffold_14788
Species: Microlunatus phosphovorus (100%)
2 3192 bp 63.75 8.04 91.82
PLM3-1_50_b1_sep16_scaffold_14626
Species: Microlunatus phosphovorus (75%)
4 3213 bp 63.80 5.74 97.57
PLM3-1_50_b1_sep16_scaffold_14549
Species: Microlunatus phosphovorus (80%)
5 3224 bp 63.90 6.23 88.86
PLM3-1_50_b1_sep16_scaffold_19181
Species: Microlunatus phosphovorus (100%)
3 3228 bp 64.16 6.97 95.26
PLM3-1_50_b1_sep16_scaffold_46043
Species: RBG_16_Actinobacteria_68_12_curated (75%)
4 3235 bp 69.92 4.31 99.04
PLM3-1_50_b1_sep16_scaffold_14318
Domain: Bacteria (75%)
4 3252 bp 64.11 6.23 86.72
PLM3-1_50_b1_sep16_scaffold_14288
Species: Sinomonas sp. MUSC 117 (50%)
4 3257 bp 64.42 6.40 88.42
PLM3-1_50_b1_sep16_scaffold_14092
Order: Micrococcales (50%)
4 3286 bp 62.20 6.57 85.36
PLM3-1_50_b1_sep16_scaffold_14058
Species: Microlunatus phosphovorus (75%)
4 3291 bp 64.84 5.97 78.58
PLM3-1_50_b1_sep16_scaffold_29273
Class: Actinobacteria (83.33%)
6 3293 bp 65.02 7.06 78.89
PLM3-1_50_b1_sep16_scaffold_27760
Order: Propionibacteriales (66.67%)
3 3310 bp 62.48 5.80 81.48
PLM3-1_50_b1_sep16_scaffold_19998
Phylum: Proteobacteria (75%)
4 3310 bp 63.66 6.44 99.79
PLM3-1_50_b1_sep16_scaffold_13899
Species: Microlunatus phosphovorus (66.67%)
3 3313 bp 63.72 6.11 86.39
PLM3-1_50_b1_sep16_scaffold_13772
Species: Microlunatus phosphovorus (50%)
4 3331 bp 62.77 8.24 92.49
PLM3-1_50_b1_sep16_scaffold_15866
Species: Microlunatus phosphovorus (66.67%)
3 3337 bp 63.65 7.82 94.58
PLM3-1_50_b1_sep16_scaffold_13565
Species: BJP_08E140C01_Actinomycetales_70_11 (50%)
4 3357 bp 61.72 5.81 95.00
PLM3-1_50_b1_sep16_scaffold_21199
Class: Actinobacteria (50%)
4 3367 bp 62.43 6.95 86.96
PLM3-1_50_b1_sep16_scaffold_13315
Species: Pseudonocardia dioxanivorans (100%)
1 3397 bp 62.32 7.59 96.44
PLM3-1_50_b1_sep16_scaffold_27215
Species: Nakamurella multipartita (50%)
4 3422 bp 64.32 5.30 91.26
PLM3-1_50_b1_sep16_scaffold_21731
Class: Actinobacteria (80%)
5 3425 bp 61.72 6.00 80.15
PLM3-1_50_b1_sep16_scaffold_29433
Species: Microlunatus phosphovorus (50%)
4 3442 bp 65.14 6.10 102.85
PLM3-1_50_b1_sep16_scaffold_16765
Species: Nakamurella multipartita (66.67%)
3 3460 bp 59.94 8.84 90.69
PLM3-1_50_b1_sep16_scaffold_12544
Species: Intrasporangium calvum (50%)
2 3512 bp 62.96 6.32 99.09
PLM3-1_50_b1_sep16_scaffold_33802
Phylum: Actinobacteria (80%)
5 3526 bp 63.13 5.23 85.34
PLM3-1_50_b1_sep16_scaffold_14531
Species: Microlunatus phosphovorus (50%)
4 3537 bp 65.88 7.12 94.66
PLM3-1_50_b1_sep16_scaffold_12367
Species: Nocardia brasiliensis (50%)
2 3539 bp 63.18 6.06 98.59
PLM3-1_50_b1_sep16_scaffold_12360
Species: Microlunatus phosphovorus (100%)
3 3540 bp 61.64 7.80 83.64
PLM3-1_50_b1_sep16_scaffold_28971 6 3553 bp 60.20 4.94 60.88
PLM3-1_50_b1_sep16_scaffold_44448
Class: Actinobacteria (66.67%)
3 3561 bp 61.36 4.21 49.79
PLM3-1_50_b1_sep16_scaffold_22075
Class: Actinobacteria (50%)
4 3568 bp 63.85 5.80 93.41
PLM3-1_50_b1_sep16_scaffold_51939
Class: Actinobacteria (57.14%)
7 3583 bp 63.22 5.69 84.31
PLM3-1_50_b1_sep16_scaffold_20137
Species: Microlunatus phosphovorus (75%)
4 3585 bp 63.91 6.36 87.70
PLM3-1_50_b1_sep16_scaffold_12046
Class: Actinobacteria (60%)
5 3590 bp 65.54 7.06 103.87
PLM3-1_50_b1_sep16_scaffold_12042
Species: Microlunatus phosphovorus (100%)
4 3591 bp 64.36 8.23 86.22
PLM3-1_50_b1_sep16_scaffold_12032
Species: Microlunatus phosphovorus (50%)
4 3593 bp 62.73 6.80 90.43
Displaying items 1-50 of 336 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.