ggKbase home page

PLM3-1_50_b1_sep16_scaffold_314

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_314_1
Synechococcus sp. RS9917, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1..792)
DNA (792bp) protein (264aa)
Possible ABC transporter Tax=Synechococcus sp. RS9917 RepID=A3Z6X9_9SYNE
Possible ABC transporter {ECO:0000313|EMBL:EAQ69244.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;"
salY; ABC transporter
PLM3-1_50_b1_sep16_scaffold_314_2
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(789..1526)
DNA (738bp) protein (246aa)
Transporter Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQ16_SPITD
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS22053.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
transporter
PLM3-1_50_b1_sep16_scaffold_314_3
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1621..3402)
DNA (1782bp) protein (594aa)
RND family efflux transporter MFP subunit Tax=Oscillochloris trichoides DG-6 RepID=E1IDD0_9CHLR
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EFO80807.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
RND family efflux transporter MFP subunit
PLM3-1_50_b1_sep16_scaffold_314_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

3798..7004
DNA (3207bp) protein (1069aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_314_5
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7061..7492
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7N5_SACES
Nickel-cobalt-cadmium resistance protein NccB {ECO:0000313|EMBL:CEL21706.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_314_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

7530..10652
DNA (3123bp) protein (1041aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_314_7
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

10667..11551
DNA (885bp) protein (295aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
PLM3-1_50_b1_sep16_scaffold_314_8
unknown

Not on your lists

comp(11564..12397)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000365D606
PLM3-1_50_b1_sep16_scaffold_314_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12477..14480
DNA (2004bp) protein (668aa)
UvrABC system protein B Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY1_CONWI
excinuclease ABC subunit B
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_314_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14678..16651
DNA (1974bp) protein (658aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_314_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16834..17109
DNA (276bp) protein (92aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B2EA1B
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_314_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

17159..18559
DNA (1401bp) protein (467aa)
metal dependent phosphohydrolase bin=bin9_gal15 species=Bacillus sp. 1NLA3E genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
metal dependent phosphohydrolase
Tax=CSP1_3_Armatimonadetes
PLM3-1_50_b1_sep16_scaffold_314_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18589..20082)
DNA (1494bp) protein (498aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2C7_ANATU
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_314_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20097..20708)
DNA (612bp) protein (204aa)
Probable DNA repair exonuclease Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W5A1_BORPA
DNA repair exonuclease
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_314_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20877..21170
DNA (294bp) protein (98aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_314_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

21250..21741
DNA (492bp) protein (164aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HMC4_9BRAD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_314_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21743..22189)
DNA (447bp) protein (149aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_314_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22319..22675)
DNA (357bp) protein (119aa)
hypothetical protein bin=bin8_Chloro species=Nocardia sp. 348MFTsu5.1 genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_314_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22769..25612
DNA (2844bp) protein (948aa)
UvrABC system protein A Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY8_CONWI
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_314_20
unknown

Not on your lists

comp(25621..26085)
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying 20 items

View Taxonomy