ggKbase home page

PLM3-1_50_b1_sep16_scaffold_91_25

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(26273..26884)

Top 3 Functional Annotations

Value Algorithm Source
Conserved repeat domain protein Tax=Frankia sp. CN3 RepID=G6H6D5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 103.0
  • Bit_score: 61
  • Evalue 7.20e-07
collagen similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 142.0
  • Bit_score: 73
  • Evalue 5.20e-11
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 197.0
  • Bit_score: 274
  • Evalue 7.60e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCGGAAGCTCTTTCGCCGGCCCTCGCCGGCAATGGTCGTTGCCTGCCTTGCGCTGCTCGTTGCACTCGGCGGGACCAGCATCGCGGCCGTGAATCAACTCGTTCCGAGAAACAGCGTCGGGTCCGCCCAGCTCCAGTTCGGCGCGGTGACGAATCCGAAGATCAGAGACAACGCCGTCAACTCGGCGAAGGTTGCGAATCGCTCGTTGCGTAGGTCCGACTTCGCCCTGGGCCAGCTTCCTGCCGGGCCCACGGGCCCGCAGGGGCCAGCAGGGCCACCAGGCGCCGCGGGCGCCGCGGGTGCCCCCGGCCCGGCGGGCACGATCGGAGCGATCACGGTCCGCTCGCAGTCTGTCTCGATCCCGGGCGGAATCGCCGAGAACGCCGCGGCGAACACTGCCGAGATCCAATCGATCTGCGCCGGGAACGAGCGCGCGATCTCGGGCGGCACGGGATGGAGCGACAGCAACCCCGGTCTCGAGCTCTGGACGGGCCGGCTCACACCGGTCTTGAACGCGTCGAGCCAGGTGGTCGGCTTCCTGGGCACTGGCGGAAACGACAGCGGTCAAGCGAGTACGTTCATCGTGTATTCGCTCTGCTACACGCCCTGA
PROTEIN sequence
Length: 204
MRKLFRRPSPAMVVACLALLVALGGTSIAAVNQLVPRNSVGSAQLQFGAVTNPKIRDNAVNSAKVANRSLRRSDFALGQLPAGPTGPQGPAGPPGAAGAAGAPGPAGTIGAITVRSQSVSIPGGIAENAAANTAEIQSICAGNERAISGGTGWSDSNPGLELWTGRLTPVLNASSQVVGFLGTGGNDSGQASTFIVYSLCYTP*