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PLM3-1_50_b1_sep16_scaffold_91_32

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(31067..31606)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5A045 similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 166.0
  • Bit_score: 90
  • Evalue 1.70e-15
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 159.0
  • Bit_score: 83
  • Evalue 4.40e-14
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 159.0
  • Bit_score: 83
  • Evalue 2.20e-13

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Taxonomy

Butyrivibrio proteoclasticus → Butyrivibrio → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGGGTGCGGCTGAGGACGATGCATCACGGCGTCCAGCGCCGCATCGGGACATGGCTGCTCGTTCCGAAGGGAGTTCCAAGGAGGAGCTCGTCGAGATCGGCCGGGTGGGCCGCCCTCACGGTCTCGACGGAGCTTTCGTCGTCGAAGCCGCCAGCGAGGATCCGAGTCGGTTCCGGGTGGGTGCCGAGCTCCTGGTCGACGGTGAGCCCGCGACCGTCATCCTTTCGCGACGAGTGGGAGGGGGCAGGCGCGCGATCAAGCTCGATCGCCGGGCCGAGCGTGGCGCGGAGCTCACGGTGTCGCGGGCGACGCTGCCGCCGCTCGACAGCGACTCGTACTACGTCGCGGACCTCGTCGGACTCGAGGTGATCGACGAGCACGGCGTTCGCGTAGGGCTCGTACGCGACGTCGTCCCGGGGCCCGCCAACGATGCGCTCGAGCTCGACACGGGCCTGCTCCTGCCACTTGTGGAGGACTGCGTGCGCGAGGTCGACCTCGAAAGCCGGCGAGTCCTTCTCAACCCCGGATTCACGGATTGA
PROTEIN sequence
Length: 180
MGAAEDDASRRPAPHRDMAARSEGSSKEELVEIGRVGRPHGLDGAFVVEAASEDPSRFRVGAELLVDGEPATVILSRRVGGGRRAIKLDRRAERGAELTVSRATLPPLDSDSYYVADLVGLEVIDEHGVRVGLVRDVVPGPANDALELDTGLLLPLVEDCVREVDLESRRVLLNPGFTD*