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PLM3-1_50_b1_sep16_scaffold_2147_4

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(2892..4106)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F003_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 427.0
  • Bit_score: 128
  • Evalue 9.60e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 413.0
  • Bit_score: 131
  • Evalue 5.40e-28
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 406.0
  • Bit_score: 423
  • Evalue 2.00e-115

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GTGACGCAGACGACGTTCCTGAACGCGTACCGCGCACTCGAGCAGGGCGTTCGCCCACGCAAGCCGTTGAACTGGCTCCTCACGATCGCGAGCAACGCGATCAAGCAGCGCTTCCGCCAGGAGCAGGCCCGTCCGAGACAGGTCGAGTACGTCGAGGGAACCGCGGAAAGCGGAGTCGAGGATGACGGCGGACCGAGCGTAGGCGAGCTCCTCGTCGCGCTCTCGAAGATTCCCCCGCAGCAACGACAGGCGATCGTGCTCCGTGAGTTCGAGGGTCGCTCGTACGCTGAGATCGCGCAGATCCTGGACGTGACCACGACCGCGCTCGAGACCCTGCTCTTCAGGGCGCGACGGTCCCTCGCCGAGGAGCTCGAGCACCAGCTCACCTGTACCGAGGCGCAGCTGGCGATCTCGCGCGCTGCGGACGGGAGGCTCGGCCGCAAGGAGCGGCGACGGCTCAGGGACCATTTGTCCGAGTGCCCGGACTGCGCGCGCTTCGCAAGCCTGCAGCAGCGGAACCGGCGCGCGCTGAAGGGCCTCATGCTCGTCCCAATTCCCCTCTCCCTCACGTTCTTCAGGGGGCTCGAAGGCACGGCAACCGCGGCGACGATGCCGGCTGCAGCGAGCGGCGTGGCCGCGGTCGGTGCGACGACGGTGGCCGCGGGGGGCGCGACGGGCGGTGGGATCTTCGCCGGCGGGATCGCCGTGAAAGCCGCAGCTGTCGTCACCGCGGCATCCTTGACCGGCGGCATCGCAGTCGTCGGCTCCTCGACGATCGACTCGAAGCCGGCCGGCAAGCCTCCCGCGAAGTCGGGGCCCGGCGAACGCCTCGGGCAGGTGGCTCCGCGCGGTGTGCTCGTCCCGGGGAACGGGGTTGCGCGCGGGAAAGCCAACGCACCCGGACAGGCCAAGCGGCTGGAGGCGAAGGAGCGACGCGCGGCGAAGGCGCGGGCTCTCGCGGCAAAGGCACGCAAGCAAGCGCGGACCGGTCGCAGCGGCGCGGCACGAGCGAACGCGCCCGGCCAAGCGAAGCGCACCGCCGAGCCAAGGAGCTCCACCGCACCCGCAGTCAAGAAGGACAACGTGCCGAAGGCGCAGGCGGGCGCCGGCCAGAATGCCGGAAAGAAGAGCATCTCCCCGTCGTCGACGAGCGGTTCGTCACCGGAGAAGCCCGAGAAGACGACCGCCCACGCCAACGGGCAGAAAGCTCGCTAA
PROTEIN sequence
Length: 405
VTQTTFLNAYRALEQGVRPRKPLNWLLTIASNAIKQRFRQEQARPRQVEYVEGTAESGVEDDGGPSVGELLVALSKIPPQQRQAIVLREFEGRSYAEIAQILDVTTTALETLLFRARRSLAEELEHQLTCTEAQLAISRAADGRLGRKERRRLRDHLSECPDCARFASLQQRNRRALKGLMLVPIPLSLTFFRGLEGTATAATMPAAASGVAAVGATTVAAGGATGGGIFAGGIAVKAAAVVTAASLTGGIAVVGSSTIDSKPAGKPPAKSGPGERLGQVAPRGVLVPGNGVARGKANAPGQAKRLEAKERRAAKARALAAKARKQARTGRSGAARANAPGQAKRTAEPRSSTAPAVKKDNVPKAQAGAGQNAGKKSISPSSTSGSSPEKPEKTTAHANGQKAR*