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PLM3-1_50_b1_sep16_scaffold_2147_9

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(8372..10249)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein Tax=Nocardioides sp. CF8 RepID=R7XVK4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 649.0
  • Bit_score: 223
  • Evalue 5.80e-55
type ii secretion system integral membrane subunit similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 646.0
  • Bit_score: 212
  • Evalue 2.20e-52
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 626.0
  • Bit_score: 774
  • Evalue 9.40e-221

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1878
GTGAGGCTTCTCGCCCGGATCGCAGTGACGAGCGCGGCACTCGCCGCGCTCGTTGCGCCGACCCTTGCTCTCGGGCAGGGCGGGGCGCCGACGCTGACGGAGGCGCAGGACTCGGAGTACCCGGACCGCGTCTATCTCTATCGGACGCCCGAACCGAGGGCACTCACCGCGTCGAATCTGGACGTGACGGAGAACGGCGGGCCGGTGTCCGGCCTGTCAGTCGACAGCGGCACGAAGTCGAGCGGCGCGATCCTCCTCATCGACGCCTCGAACAGCATGGCGGGCGCTCCGATCGCCGGCGCCATGGCTGCGGCTCGCGCGTTCATGGCCGAGCGTAAGGACGAGCTTCCCGTCGCGGTCATCGCCTACAACCCTGAGATCACGGTTCTGACCGACTTCACGACCGACAAGGGAGAGCTGTCCGCGGCAGTGGCCAAGGCGCCTGCCCTTGCGGAAGGCACGAAGATCTACGACGCGCTCATCGAGGCCGCCGACCTTGCGAAGTCCGCCGGGTACGCGCGGACGACCGCGGTCCTGCTCTCGGACGGCCACAGGCGCGGCGTTCAGGCGAGCCGCGCCGAGACCCTCCAGGCACTCCACGACGCGAATGTGCGCGTGATCTCGGTCGGCCTCCGCTCGCCCGAGTACGACGCCGAGACGCTGCAGAGCATGGCGCGGCGAACCGGCGGCACGTTCGTCGAGAGTTCCAGCCCGGCGGCGCTCGAATCGATCTTCACGGCGATCGGTCAGCAGCTGTCGAACGAGTACGTCGTCGCCTACCGGTCCCTGCTCGGGCCGAACGTGAAAGCGACCGTGGCGGTGACGGCCGCTGGCCTCCCCACCGCGACGGCCAGCTACACGACTCCCGCGCTCGACTTCGCAGCGCGCGGTACGTTCGAGCGCAACTGGATCGACGAGGTGATCACCTCGCCGTGGCTGATGGTGTTCGTGATCGTCTCCGTCCTCGCGCTCGTCGCGTTCGCCCTGCTCACGGCCGTCGATGTGCGCAATCGCTCGCTGCGGCGTCGCATGGCTCAGTACGTCACCGTCCCGACCGAGGAAGAGTCCCGGCTCCGGCGGGCGGAGGTAACGGCGATGCTCGCCGACACTGCGCAGAAGACCGTCGGCGGTCAGAAGTGGTGGCAACGCTTCGAGACGGACGTCGAGCTCGGCGGGTGGAGATTGTCGGCGCTCGCGATCGCGGGCTGGACGATCGTCGGTGGGATCGCAGCCTCGATCGTCGCCGCCATCGTCCTGCAGTCGCTCTGGGCGCTGCTCCTCGGGCTCCTCGCGCCGTTCTTCACCCGGTGGCTCGTCTCACGCCGCGTTAGCAAGAAGCGGAAGGATTTCCAAGAGCAGCTGCCCGACAACCTCGACGTGCTCGCCGGCGCGATGCGGACGGGGCACTCTACGATGGGCGCCCTGAGCGTCATGGTGGACAGCGCCGACGAGCCCTCGAAGGGGGAGTTCCGCCGCGTCCTCCAGGACGAGCAGCTCGGCGTTCCGCTCGACGAGGCGCTCATGGTGATGGCGCGCCGCATGGCAAGCGAGGATGCCGAGCAGATCGCCCTCGTGATGCGACTTCAGCGCGAAGCCGGAGGCAACACGGCCGAGGTGCTCGATCGCGTCGCAGAGGTGATCAGGGGCCGGATGGAGCTCAGGCGGCTCGTGGACGTCCTCACCGCCCAGGCGCGCATCTCCCGGTGGATCCTGACGGGCCTGCCCATCTTCGTGCTCCTCTCGCTGATTTTCACGGGTGGAGACTTCCTCGACCCGATGATCAACTCGCTGGTTGGCCGGATCGCGCTGGTTTTTGCAGCGGTCATGGTCGTGATCGGCTCCCTCTGGATCAAGCGACTCGCGAAGATGGACGTGTGA
PROTEIN sequence
Length: 626
VRLLARIAVTSAALAALVAPTLALGQGGAPTLTEAQDSEYPDRVYLYRTPEPRALTASNLDVTENGGPVSGLSVDSGTKSSGAILLIDASNSMAGAPIAGAMAAARAFMAERKDELPVAVIAYNPEITVLTDFTTDKGELSAAVAKAPALAEGTKIYDALIEAADLAKSAGYARTTAVLLSDGHRRGVQASRAETLQALHDANVRVISVGLRSPEYDAETLQSMARRTGGTFVESSSPAALESIFTAIGQQLSNEYVVAYRSLLGPNVKATVAVTAAGLPTATASYTTPALDFAARGTFERNWIDEVITSPWLMVFVIVSVLALVAFALLTAVDVRNRSLRRRMAQYVTVPTEEESRLRRAEVTAMLADTAQKTVGGQKWWQRFETDVELGGWRLSALAIAGWTIVGGIAASIVAAIVLQSLWALLLGLLAPFFTRWLVSRRVSKKRKDFQEQLPDNLDVLAGAMRTGHSTMGALSVMVDSADEPSKGEFRRVLQDEQLGVPLDEALMVMARRMASEDAEQIALVMRLQREAGGNTAEVLDRVAEVIRGRMELRRLVDVLTAQARISRWILTGLPIFVLLSLIFTGGDFLDPMINSLVGRIALVFAAVMVVIGSLWIKRLAKMDV*