ggKbase home page

PLM3-1_50_b1_sep16_scaffold_2670_1

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(82..984)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Tax=Patulibacter americanus RepID=UPI0003B6EE4D similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 314.0
  • Bit_score: 291
  • Evalue 6.30e-76
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 298.0
  • Bit_score: 288
  • Evalue 1.20e-75
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 300.0
  • Bit_score: 436
  • Evalue 2.20e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGCAAGTCTTCGCTTCACCGTCGCTGAGGACGACGCAGGCTCGCGTCTCGACCGGGCGCTCGCGGTGCGAGCCGAGATCCGGTCGCGCTCGCTCGCCGAGCGGCTGGTCCAGGAGGGCTCGGTCCTGGTCGACGGCGTCGCGCGTCCCAAGAGCCATCGACTCGAGCCCGGCTCGACGATCGAGGTCACGCTTCCCGCGGCTGTCGAAGGTGTCCAGGCGCAGCCGGTTACCGTTCGCGTGCTTCTCGAGGACGAGCATCTCGTCGTCGTCGACAAGCCCGCGGGACTGACGGTGCACCCCGGCGCGGGAAGGCGGACTGACACCCTCGCCGCGCAGCTCGTCACCCTGGGGGCTCGCGGCGGCGACGATCCGGAGCGGCCGGGCATCGTCCACCGTCTCGACCGCGATACGTCCGGACTCCTCGTCGCAACGCGATCCGAGCGCGCGTATGCCGGGCTTCGGAATGCAATTCGTCGTCGTGAGGTCGAGCGCAGGTACCTGGCGCTGGTTCGCGGGCACCCGCGCTCGCGCACGGGCCGGATCGACGCGCCGATCGGCCGCGCGCGCCGCGACCCGACGAGGCGTTCGCTCGACACCGACGAGCCCCGCGAGGCGGTGACCCACTTCGAAGTGGTGGAGACCGCAGGGGAGCATGCGCTCCTCGACGTCTCGCTGGAAACGGGTCGGACACACCAGATCCGGGTCCATTTGGCCTCGATCGACCTTCCCGTGTCGGGCGATCCCCTGTACGGCGTCAGGGGGGATCTCGGGCTCGAGCGCCAGTTCCTGCACGCACACCGCCTGCGGTTCAGGCACCCGGTCACAGGTGGTGAGGTCGACGTCTCGTCTGATCTTCCAGACGACCTCGGCGCCGCCCTCGAGCGCGCGCGCGCGGTGTAA
PROTEIN sequence
Length: 301
MASLRFTVAEDDAGSRLDRALAVRAEIRSRSLAERLVQEGSVLVDGVARPKSHRLEPGSTIEVTLPAAVEGVQAQPVTVRVLLEDEHLVVVDKPAGLTVHPGAGRRTDTLAAQLVTLGARGGDDPERPGIVHRLDRDTSGLLVATRSERAYAGLRNAIRRREVERRYLALVRGHPRSRTGRIDAPIGRARRDPTRRSLDTDEPREAVTHFEVVETAGEHALLDVSLETGRTHQIRVHLASIDLPVSGDPLYGVRGDLGLERQFLHAHRLRFRHPVTGGEVDVSSDLPDDLGAALERARAV*