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PLM3-1_50_b1_sep16_scaffold_1370_2

Organism: PLM6_50_b1_sep16_Chloroflexi_RIF-CHLX_69_8

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(766..1341)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 184
  • Evalue 5.30e-44
RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 172.0
  • Bit_score: 100
  • Evalue 4.90e-19
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 186
  • Evalue 3.30e-44

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAACGCCGAGCGAAGCAGGGCAGTCGATGAGCGACAGCTCGTCGAGGCCGCTCGAGCCGGCGATACAGGGGCATTCGAACTGTTGGTCCACCAGCAGGTCGATCGCCTCTACGGCGCCGCGAGAGTGATGCTCGGCGAAGCCGACGTGGCCGAAGACGCGGTCCAGGGAGCGCTCGTCAAGGCATGGCGGGACCTGCCGAGCCTGCGCGACGCGGATCGCTTCGGCCCCTGGCTCCAGAAGCTGCTCGTGCGCGCGTGCTACGACGAAGCCCGCCGGCGCCGTCGCTGGGCGGCGACGGTGCGCCTGCTGCCGGCAGCAGACGACACGTCACTGGCCACGGGCATCGCCGACCGCGAGGTGATCGAGCGCGGCCTGGGTGCCCTGTCCGTTGATCACCGATTGATCCTGGTCCTGCACTTCTACCTCGACCTATCGCCGGCTGAGATCGCCGATCGACTGGGCATCCCGGGCGGGACCGCCCGGTCGCGGCTCCATTACGCCTTGGTCGCCCTGCGCGCCGCGGTCGACGCCACGGAACGGCGACCCGGCACCGGAACGGGGAGCGTCGCATGA
PROTEIN sequence
Length: 192
MNAERSRAVDERQLVEAARAGDTGAFELLVHQQVDRLYGAARVMLGEADVAEDAVQGALVKAWRDLPSLRDADRFGPWLQKLLVRACYDEARRRRRWAATVRLLPAADDTSLATGIADREVIERGLGALSVDHRLILVLHFYLDLSPAEIADRLGIPGGTARSRLHYALVALRAAVDATERRPGTGTGSVA*