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PLM3-1_50_b1_sep16_scaffold_9051_6

Organism: PLM6_50_b1_sep16_Chloroflexi_RIF-CHLX_69_8

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3708..4214)

Top 3 Functional Annotations

Value Algorithm Source
potD; spermidine/putrescine ABC transporter; K11069 spermidine/putrescine transport system substrate-binding protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Rhizobium sp. AP16 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 167.0
  • Bit_score: 159
  • Evalue 1.60e-36
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 148.0
  • Bit_score: 66
  • Evalue 5.20e-09
Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 167.0
  • Bit_score: 210
  • Evalue 1.50e-51

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Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 507
GAGACAGCGATCACCGACGAGCAGCTAGCCGATATCGAGGCCGAATGGACCGCGCAGAAGGATCTGAATCTCCACTACTGGGACTCGGAGTACGACAACCTGTGCCCGGAGGTCATCAGCGGCGAGATCTGGATCGCCTACGCGTGGCAGGGCTGCTTCTCGACCGCACTCGGCGAGGGCACCCCGGTCGCGTACGCCAACCCTGAAGAGGGTCGGAACTCGTGGGTCGGCCTGTACGGCATCAGTGCCGATTCCGACAGCCCCGAGCTCGCCCTCGAGTTCCTCGACCAGAAGCTCGCCGAGCTGACGTGCAGCAACGCGGTCACGCTCTTCTACTACGGCTGCGCGCGGTCCGACGTGATGGAGGGCATCGAAGATCCGTTCATCATCGAGGTCTTCGGGCTCGATGACCCATCGATCCTGGAGAACACGAACTTCACCCCGAACATCACCGAGGAGCAGCGCGACGCGTGGACCCAGATGTGGACGCGCGTCAAGGCGGAGTAG
PROTEIN sequence
Length: 169
ETAITDEQLADIEAEWTAQKDLNLHYWDSEYDNLCPEVISGEIWIAYAWQGCFSTALGEGTPVAYANPEEGRNSWVGLYGISADSDSPELALEFLDQKLAELTCSNAVTLFYYGCARSDVMEGIEDPFIIEVFGLDDPSILENTNFTPNITEEQRDAWTQMWTRVKAE*