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PLM1_30_b1_sep16_scaffold_4682

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_4682_1
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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2..685
DNA (684bp) protein (228aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
Purine nucleoside phosphorylase Tax=Desmospora sp. 8437 RepID=F5SB81_9BACL
inosine guanosine and xanthosine phosphorylase family
PLM1_30_b1_sep16_scaffold_4682_2
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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727..1980
DNA (1254bp) protein (418aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Adenosylhomocysteinase Tax=Frankia sp. (strain EuI1c) RepID=E3J0X6_FRASU
PLM1_30_b1_sep16_scaffold_4682_3
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2262..2960)
DNA (699bp) protein (233aa)
RDD domain-containing protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Y726_9PSEU
transporter
Transporter {ECO:0000313|EMBL:AJK55557.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM1_30_b1_sep16_scaffold_4682_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2957..3472)
DNA (516bp) protein (172aa)
Lrp/AsnC family transcriptional regulator Tax=Amycolatopsis mediterranei RepID=D8HZC5_AMYMU
lrp; Lrp/AsnC family transcriptional regulator
Lrp/AsnC family transcriptional regulator {ECO:0000313|EMBL:AEK39166.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_30_b1_sep16_scaffold_4682_5
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3566..4231
DNA (666bp) protein (222aa)
Putative transporter Tax=Amycolatopsis orientalis subsp. vinearia RepID=D7RFL8_AMYOR
Putative transporter {ECO:0000313|EMBL:ADI71466.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis subsp. vinearia.;"
major facilitator superfamily permease
PLM1_30_b1_sep16_scaffold_4682_6
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4331..4657
DNA (327bp) protein (109aa)
Putative transporter Tax=Amycolatopsis orientalis subsp. vinearia RepID=D7RFL8_AMYOR
Putative transporter {ECO:0000313|EMBL:ADI71466.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis subsp. vinearia.;"
multidrug ABC transporter permease
PLM1_30_b1_sep16_scaffold_4682_7

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4731..5822
DNA (1092bp) protein (364aa)
Putative integral membrane protein Tax=uncultured bacterium A1Q1_fos_568 RepID=L7VUN9_9BACT
Putative integral membrane protein {ECO:0000313|EMBL:AGC71189.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_568.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_4682_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5819..6607
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase SDR Tax=Micromonospora lupini str. Lupac 08 RepID=I0LAT8_9ACTO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCH20935.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
short-chain dehydrogenase/reductase SDR
PLM1_30_b1_sep16_scaffold_4682_9
unknown

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comp(6604..6807)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_4682_10
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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6936..7112
DNA (177bp) protein (59aa)
Orotate phosphoribosyltransferase bin=GWF2_Ignavibacteria_33_9 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
pyrE; orotate phosphoribosyltransferase
Tax=GWF2_RIF_IGX_33_9_curated
PLM1_30_b1_sep16_scaffold_4682_11
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(7146..8540)
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVG7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM61844.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_4682_12

Not on your lists

comp(8552..9529)
DNA (978bp) protein (326aa)
MoxR-like ATPases Tax=uncultured bacterium A1Q1_fos_568 RepID=L7VQI4_9BACT
MoxR-like ATPases {ECO:0000313|EMBL:AGC71187.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_568.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_4682_13
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9563..10681)
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2P3M8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY15888.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_4682_14
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10678..11268)
DNA (591bp) protein (197aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000375C0C4
Uncharacterized protein {ECO:0000313|EMBL:KJY30360.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_4682_15
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11438..11905)
DNA (468bp) protein (156aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S91_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD39452.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Displaying 15 items

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