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PLM1_30_b1_sep16_scaffold_1821_8

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(5762..6328)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037808EF similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 168.0
  • Bit_score: 167
  • Evalue 8.60e-39
Transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 168.0
  • Bit_score: 165
  • Evalue 1.20e-38
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH31338.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 168.0
  • Bit_score: 165
  • Evalue 6.00e-38

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Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGTCGCGCCCGAGCTCGTCCGGGACGCGCTCGGCGGCGGCCCGCTGCCGTTCGTGGGGCGGCCCGCTGCCGTTCGTGGCCGACCCGGTGCAGACCCTGGCCCCGGCCACTCGGCTGGTCGCCTCGCTGCTGGTCGACATCGACGAGCCGATCAGCGACCTCGCCCGGGCCGAGATCGCGGCCACGCTGGCCGACACCCTCCGCGAGCTCGGCGGCCGGCCCGGCCCGGGCCCGGCCACCATCGATCTCCGGGCCGTCGGGCTGGCCCGCGACTACCTGGCCGCCCACGCGAGCGAGCAGACGCCGGCCTCGACCCTGGAGGCGGTCACCGGGGTCGACCGGTTCACCCTGGCCCGCCAGTTCCGGCGGGCCTTCGGGACCAGCCCCGACCGCTACCGGACGATGCGTCGCCTCGGGCTGGCCCGGGCCGCGATCGAGCGCGGGCTCCCGCTCGCCGAGGCCGCCGCCTCCTCCGGGTTCGCCGACCAGAGCCACATGACCCGCCAGTTCAAGCGGGCCTACGGCCTGACACCGGCCCGCTGGACGGCCCTCACCGGCGGGCGCTGA
PROTEIN sequence
Length: 189
MSRPSSSGTRSAAARCRSWGGPLPFVADPVQTLAPATRLVASLLVDIDEPISDLARAEIAATLADTLRELGGRPGPGPATIDLRAVGLARDYLAAHASEQTPASTLEAVTGVDRFTLARQFRRAFGTSPDRYRTMRRLGLARAAIERGLPLAEAAASSGFADQSHMTRQFKRAYGLTPARWTALTGGR*