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PLM1_30_b1_sep16_scaffold_1889_7

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(6146..6763)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR Tax=Frankia sp. CN3 RepID=G6H7R4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 200.0
  • Bit_score: 139
  • Evalue 2.10e-30
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KJE25210.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 185.0
  • Bit_score: 131
  • Evalue 8.00e-28
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 189.0
  • Bit_score: 124
  • Evalue 3.40e-26

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGACGCTGGCCCCGACGAGCACCGACCGTGGCTCCGAGACCCGCCGCCGCATCCTGGAGGTGGCCGCCGAGGCCTTCGCCGACCGCGGCTACGCCGGCACCTCGGTCAACGACGTGCTCAAGGCCAGCGGTGTCACCAAGGGCGGCTTCTACTTCCATTTCCCGTCCAAGGAGGCGCTGGCCCTGGCCACCCTCCGGCACAAGCAGGAGCAGTGGGCCGGGATGGTGATGGCGGCCGTGATGCGCCGGCCGCGGGCCGTCGAGCAGCTCGAGGCCATGGTCGACGCGCTCTGCGACCTGCACGAGCAGGACCGTGCGTGCCGTGCCATAAGCCGGCTCTGCACCGAGCTGGGCGACGAGCGCCCCGAGCTGCGCCCGCAGCTCGGCACCCAGCTCACCACCTGGATGGACATGGTCGCCGCGGTCATCCGCAAGGGCCAGGACGAGGGCGAGATCCGGCCCGAAGTCGAGCCGGCGGTGGCGGCCGAGATCGCGGTCGAGTCCTTCATCGGCCTGGAGACCGTCTCCGAGATCCTGACCGGCCGTGCCGACCTGCGCCGGCGGGCCAGGGACTTCCGCGACCTGTGGTTCGCGGCCATCCGCCAGCCCACCACCTGA
PROTEIN sequence
Length: 206
MTLAPTSTDRGSETRRRILEVAAEAFADRGYAGTSVNDVLKASGVTKGGFYFHFPSKEALALATLRHKQEQWAGMVMAAVMRRPRAVEQLEAMVDALCDLHEQDRACRAISRLCTELGDERPELRPQLGTQLTTWMDMVAAVIRKGQDEGEIRPEVEPAVAAEIAVESFIGLETVSEILTGRADLRRRARDFRDLWFAAIRQPTT*